Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU4-49P-201ENST00000516080 140 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 RNU6-718P-201ENST00000516166 105 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 MIR6128-201ENST00000615528 109 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
POLR1EQ9GZS1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 U3.8-201ENST00000363675 217 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 RNU6-595P-201ENST00000363944 107 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AC010154.1-201ENST00000425857 269 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 TOMM22P2-201ENST00000430735 237 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 MTND4LP16-201ENST00000440828 295 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AC092473.1-201ENST00000441098 221 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 RNU7-175P-201ENST00000515915 61 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 SNORA31.10-201ENST00000516482 106 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 RNU7-128P-201ENST00000517247 62 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AL590705.4-201ENST00000532209 134 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 AC022217.4-201ENST00000604389 163 ntBASIC1.18□□□□□ -2.22
POLR1EQ9GZS1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 RNU6-793P-201ENST00000384233 104 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 RNU1-54P-201ENST00000517181 120 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 SUMO2P16-201ENST00000519475 264 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AC134698.4-201ENST00000523451 826 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 MIR4498-201ENST00000577599 66 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AL359075.3-201ENST00000613288 217 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 AL133216.2-202ENST00000634512 349 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 ZNF299P-201ENST00000406845 1804 ntBASIC1.17□□□□□ -2.22
POLR1EQ9GZS1 RNU6-222P-201ENST00000362438 107 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 RNU6-280P-201ENST00000364145 104 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AL356776.1-201ENST00000406574 447 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 HSPE1P13-201ENST00000451143 297 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 SNORD5.1-201ENST00000458800 75 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC011352.1-201ENST00000512300 793 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC108729.3-201ENST00000513484 108 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC093303.1-201ENST00000514549 295 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 Y_RNA.682-201ENST00000516457 100 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 MIR4790-201ENST00000577799 79 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 MIR3664-201ENST00000579074 99 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 MIR5695-201ENST00000579717 85 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 AL359821.1-201ENST00000605519 182 ntBASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1EQ9GZS1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 RN7SKP200-201ENST00000410564 320 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 MTND4P18-201ENST00000447010 465 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 RNU6-329P-201ENST00000459618 107 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 MTND5P5-201ENST00000503764 376 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.655-201ENST00000515919 96 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 7SK.7-201ENST00000603504 247 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 AC021506.2-201ENST00000612354 169 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 U6.73-201ENST00000619194 103 ntBASIC1.15□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 RNU6-281P-201ENST00000384212 103 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 RPL23AP36-201ENST00000413895 458 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AC018638.8-201ENST00000588755 281 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AC010999.1-201ENST00000611856 324 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 AC093913.1-201ENST00000614178 329 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 MIR8054-201ENST00000620877 86 ntBASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.14□□□□□ -2.23
POLR1EQ9GZS1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 SNORD65B-201ENST00000459126 73 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC069439.1-201ENST00000494739 167 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC026782.1-201ENST00000512952 449 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC027419.1-201ENST00000522976 328 ntBASIC1.13□□□□□ -2.23
POLR1EQ9GZS1 AC022432.1-201ENST00000595739 310 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms