Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR8076-201ENST00000611401 83 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AC126177.8-201ENST00000618339 1015 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
COL21A1Q96P44 RNU6-1123P-201ENST00000362347 106 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 Y_RNA.123-201ENST00000363338 102 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 Y_RNA.160-201ENST00000363677 92 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 Y_RNA.390-201ENST00000383932 102 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 RNU6-784P-201ENST00000384330 106 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 MIR194-1-201ENST00000384892 85 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 MIR521-1-201ENST00000384902 87 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 MIR548B-201ENST00000385247 97 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 MRPL35P1-201ENST00000404272 572 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.06□□□□□ -2.24
COL21A1Q96P44 snoU13.6-201ENST00000458785 104 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 RNU6-329P-201ENST00000459618 107 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.06□□□□□ -2.24
COL21A1Q96P44 RNU6-566P-201ENST00000516790 107 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 RNA5SP54-201ENST00000516951 92 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.06□□□□□ -2.24
COL21A1Q96P44 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
COL21A1Q96P44 MIR4742-201ENST00000581069 85 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 AC016727.2-201ENST00000603988 621 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.06□□□□□ -2.24
COL21A1Q96P44 AC093913.1-201ENST00000614178 329 ntBASIC1.06□□□□□ -2.24
COL21A1Q96P44 RNU1-93P-201ENST00000364704 169 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 Y_RNA.393-201ENST00000383936 102 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-933P-201ENST00000384424 107 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-790P-201ENST00000384479 105 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-306P-201ENST00000384617 107 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 MIR517A-201ENST00000385001 87 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 MT-TL1-201ENST00000386347 75 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-876P-201ENST00000391295 104 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
COL21A1Q96P44 AC008134.1-201ENST00000420943 193 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 SNX2P2-201ENST00000424553 323 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 MTND1P17-201ENST00000448961 204 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNU6-1198P-201ENST00000516904 67 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 RNA5SP454-201ENST00000517231 127 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.05□□□□□ -2.24
COL21A1Q96P44 MRPS36P4-201ENST00000534436 298 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.05□□□□□ -2.24
COL21A1Q96P44 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.05□□□□□ -2.24
COL21A1Q96P44 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 AC008873.1-201ENST00000625051 138 ntBASIC1.05□□□□□ -2.24
COL21A1Q96P44 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL21A1Q96P44 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
COL21A1Q96P44 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 Y_RNA.72-201ENST00000362894 103 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 RNU1-22P-201ENST00000363334 158 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 Y_RNA.279-201ENST00000364763 95 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 RNU6-1013P-201ENST00000384180 107 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 RNU6-510P-201ENST00000391239 108 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 MTND3P8-201ENST00000412909 339 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 PCMTD1P1-201ENST00000455560 355 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 RPS26P45-201ENST00000471748 340 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 AL163195.1-201ENST00000496941 348 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 Y_RNA.682-201ENST00000516457 100 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 MIR4790-201ENST00000577799 79 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 AC005730.3-201ENST00000583067 366 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 AC019193.3-201ENST00000609144 554 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.04□□□□□ -2.24
COL21A1Q96P44 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.04□□□□□ -2.24
COL21A1Q96P44 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
COL21A1Q96P44 SNORD50.1-201ENST00000362987 71 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 Y_RNA.184-201ENST00000363884 108 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 RNU6-245P-201ENST00000384020 107 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 RNU6-767P-201ENST00000384132 107 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL21A1Q96P44 MIR1253-201ENST00000408273 105 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 MIR548F5-201ENST00000408421 86 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 RPL37P10-201ENST00000412884 288 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 PDCL2P1-201ENST00000419302 352 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.03□□□□□ -2.24
COL21A1Q96P44 TOMM22P2-201ENST00000430735 237 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.03□□□□□ -2.24
COL21A1Q96P44 DAP3P1-201ENST00000441522 278 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AC073910.1-201ENST00000445047 438 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AC079354.2-201ENST00000453523 154 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AF186996.7-201ENST00000492781 209 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 MTND5P5-201ENST00000503764 376 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 RNU7-30P-201ENST00000516835 62 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 POLR3GP2-201ENST00000588366 668 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 AC124303.1-201ENST00000605703 360 ntBASIC1.03□□□□□ -2.24
COL21A1Q96P44 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
COL21A1Q96P44 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL21A1Q96P44 RNU6-845P-201ENST00000362578 103 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 RNU5F-3P-201ENST00000363767 117 ntBASIC1.02□□□□□ -2.25
COL21A1Q96P44 Y_RNA.339-201ENST00000365325 102 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms