Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6-859P-201ENST00000362728 107 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 RNU6-23P-201ENST00000363283 107 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 SNORD114-6-201ENST00000364393 72 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 Y_RNA.552-201ENST00000384665 112 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 AP005660.1-201ENST00000522972 293 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.89□□□□□ -1.95
SYNPOQ8N3V7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 SNORD115-30-201ENST00000364117 82 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 BMS1P22-201ENST00000414726 313 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 AC024067.1-201ENST00000426199 223 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 SNORD65B-201ENST00000459126 73 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 RPL39P38-201ENST00000467018 153 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 RNU6-436P-201ENST00000516171 114 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 AL512605.2-201ENST00000592972 256 ntBASIC2.88□□□□□ -1.95
SYNPOQ8N3V7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNU4-80P-201ENST00000363200 141 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 SNORA20B-201ENST00000384220 132 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AL138827.1-201ENST00000402666 306 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNA5SP270-201ENST00000411361 118 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AL513328.1-201ENST00000446460 224 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RPS27P22-201ENST00000478056 241 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AP004217.1-201ENST00000480579 346 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AC010409.1-201ENST00000487382 476 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 SERF1AP1-201ENST00000514575 187 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNA5SP385-201ENST00000515947 110 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AC012433.1-201ENST00000588916 398 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 SNORD14A-201ENST00000606526 91 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AC141273.2-201ENST00000618989 130 ntBASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SYNPOQ8N3V7 AC009487.4-201ENST00000624969 3585 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 MIR340-201ENST00000362125 95 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 AC060773.1-201ENST00000421698 310 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 MTND4LP30-201ENST00000454092 297 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 AC091544.4-201ENST00000555268 342 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 RPL21P9-201ENST00000556149 474 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 MIR3684-201ENST00000579779 74 ntBASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNPOQ8N3V7 AL355796.1-201ENST00000406706 323 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 RNU2-64P-201ENST00000411315 191 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AC016909.1-201ENST00000415916 166 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AL121890.1-201ENST00000435457 205 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AL139109.1-201ENST00000455491 297 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AC010598.1-201ENST00000510378 103 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AC011406.1-201ENST00000512440 370 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 SNORA70.12-201ENST00000516084 153 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 Y_RNA.673-201ENST00000516306 88 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 AL590808.1-201ENST00000618696 141 ntBASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SYNPOQ8N3V7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 Y_RNA.124-201ENST00000363339 93 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 SNORD27-201ENST00000363981 72 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RNA5SP493-201ENST00000364115 91 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 SNORA20.1-201ENST00000364790 130 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RNU6-326P-201ENST00000365480 107 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RNU6-417P-201ENST00000384712 107 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MIR29C-201ENST00000385231 88 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MIR548I3-201ENST00000408378 149 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MIR1261-201ENST00000408659 82 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MIR548I1-201ENST00000408810 149 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 BX510359.4-201ENST00000423750 193 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 TRBV12-1-201ENST00000479785 344 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MIR5194-201ENST00000582634 120 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 AC127459.3-201ENST00000624328 466 ntBASIC2.84□□□□□ -1.95
SYNPOQ8N3V7 RNA5SP68-201ENST00000363885 119 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 RNU11-3P-201ENST00000391111 133 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 MTCO1P5-201ENST00000433573 344 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 YWHAEP4-201ENST00000505390 198 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 RNU6-111P-201ENST00000517179 105 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 SUMO2P18-201ENST00000518873 252 ntBASIC2.83□□□□□ -1.96
SYNPOQ8N3V7 AC087441.2-201ENST00000529141 262 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms