Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU6-613P-201ENST00000410412 108 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 BTBD7P2-201ENST00000441962 620 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 SNORD22.1-201ENST00000516331 125 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 MIR3139-201ENST00000579145 76 ntBASIC-1.38□□□□□ -2.63
VPS13CQ709C8 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU6-83P-201ENST00000384568 112 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU6-135P-201ENST00000516769 101 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC022784.5-201ENST00000522241 437 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC022022.2-201ENST00000602989 360 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 ART2BP-201ENST00000453501 499 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU7-94P-201ENST00000459576 63 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC009646.1-201ENST00000510455 318 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 YWHAEP3-201ENST00000582767 121 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AL358072.1-201ENST00000604156 575 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU6-86P-201ENST00000606534 107 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 SNORD82-201ENST00000365530 70 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC024995.1-201ENST00000523014 93 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13CQ709C8 VN1R83P-201ENST00000595685 445 ntBASIC-1.39□□□□□ -2.63
VPS13CQ709C8 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 MIR889-201ENST00000401280 79 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 MTCO1P17-201ENST00000411522 491 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 USMG5P1-201ENST00000425964 177 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 AL445193.1-201ENST00000441183 141 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 AL158053.1-201ENST00000441503 453 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-1.4□□□□□ -2.63
VPS13CQ709C8 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 AL159972.1-201ENST00000625150 448 ntBASIC-1.4□□□□□ -2.63
VPS13CQ709C8 BTF3P15-201ENST00000455606 336 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.41□□□□□ -2.63
VPS13CQ709C8 RNU6-469P-201ENST00000516253 101 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.41□□□□□ -2.63
VPS13CQ709C8 MIR3192-201ENST00000584920 77 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 SNORD31B-201ENST00000364977 69 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 SNORD51-201ENST00000384320 80 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.41□□□□□ -2.63
VPS13CQ709C8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.41□□□□□ -2.63
VPS13CQ709C8 AL390123.1-201ENST00000603216 237 ntBASIC-1.41□□□□□ -2.63
VPS13CQ709C8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.41□□□□□ -2.63
VPS13CQ709C8 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.41□□□□□ -2.64
VPS13CQ709C8 RNA5SP86-201ENST00000390869 98 ntBASIC-1.41□□□□□ -2.64
VPS13CQ709C8 RNU2-23P-201ENST00000410545 195 ntBASIC-1.41□□□□□ -2.64
VPS13CQ709C8 AC244505.6-201ENST00000452829 130 ntBASIC-1.41□□□□□ -2.64
VPS13CQ709C8 AL136221.1-201ENST00000621449 509 ntBASIC-1.41□□□□□ -2.64
VPS13CQ709C8 RNU6-432P-201ENST00000384196 109 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 BX276092.1-201ENST00000427368 251 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 SNORD115-44-201ENST00000365391 82 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.42□□□□□ -2.64
VPS13CQ709C8 MIR1302-7-201ENST00000408841 72 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 RNU2-15P-201ENST00000410692 191 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 AC008494.2-201ENST00000514544 370 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 AL157687.1-201ENST00000554853 619 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 RNU6-727P-201ENST00000363592 107 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 RNU6-31P-201ENST00000384388 108 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 AC010154.1-201ENST00000425857 269 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 LARP1BP3-201ENST00000437229 869 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 SNRPEP8-201ENST00000442866 260 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 RNA5SP484-201ENST00000458857 111 ntBASIC-1.42□□□□□ -2.64
VPS13CQ709C8 RNU6-721P-201ENST00000410155 105 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 RNU2-47P-201ENST00000410649 186 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AL139824.2-201ENST00000458731 1095 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 TMEM251P1-201ENST00000503717 318 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 SNORA74.3-201ENST00000517108 154 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 LRRC6P1-201ENST00000532188 885 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AL359075.3-201ENST00000613288 217 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AP000484.1-201ENST00000620067 1252 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.43□□□□□ -2.64
VPS13CQ709C8 SNORD115-27-201ENST00000364430 82 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.43□□□□□ -2.64
VPS13CQ709C8 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 SNRPGP1-201ENST00000553864 222 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AC234772.3-201ENST00000602277 528 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AC010468.3-201ENST00000508225 458 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 AC104260.1-201ENST00000616660 539 ntBASIC-1.43□□□□□ -2.64
VPS13CQ709C8 RNU4-21P-201ENST00000362802 126 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU6-396P-201ENST00000365369 105 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 MCFD2P1-201ENST00000417812 300 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 FO393419.3-201ENST00000428741 282 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AL929288.2-201ENST00000446368 407 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AC011352.1-201ENST00000512300 793 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AC010205.1-201ENST00000616668 449 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU6-63P-201ENST00000516690 95 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 MIR4782-201ENST00000577987 79 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AC104820.1-201ENST00000624183 307 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 AP000568.1-201ENST00000282964 442 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 RNU6-244P-201ENST00000391028 104 ntBASIC-1.44□□□□□ -2.64
VPS13CQ709C8 CALM2P4-201ENST00000430810 426 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms