Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.23□□□□□ -2.21
ATL3Q6DD88 RNU7-175P-201ENST00000515915 61 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 Y_RNA.655-201ENST00000515919 96 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 RNU4-49P-201ENST00000516080 140 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 RNU7-128P-201ENST00000517247 62 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 FRG2DP-202ENST00000566967 323 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 MIR3937-201ENST00000580135 106 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC103810.9-201ENST00000606688 112 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AL078604.3-201ENST00000615580 211 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 AC002553.4-201ENST00000616896 331 ntBASIC1.23□□□□□ -2.21
ATL3Q6DD88 ZNF299P-201ENST00000406845 1804 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RNU6-1013P-201ENST00000384180 107 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RNU6-281P-201ENST00000384212 103 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RNU6-950P-201ENST00000384651 107 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RNA5SP109-201ENST00000391010 116 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RPL21P1-201ENST00000399532 476 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC009161.1-201ENST00000417306 376 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC008134.1-201ENST00000420943 193 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.22□□□□□ -2.21
ATL3Q6DD88 MTND4LP16-201ENST00000440828 295 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RPS26P45-201ENST00000471748 340 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC092989.1-201ENST00000481235 277 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 HMGN1P12-201ENST00000499125 195 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC093303.1-201ENST00000514549 295 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 SNORA31.10-201ENST00000516482 106 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 RNU6-273P-201ENST00000516937 96 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AL590705.4-201ENST00000532209 134 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.22□□□□□ -2.21
ATL3Q6DD88 MIR4273-201ENST00000582824 84 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC018638.8-201ENST00000588755 281 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 MZT1P2-201ENST00000604387 248 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AC022217.4-201ENST00000604389 163 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 MIR6734-201ENST00000621166 68 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 AL133216.2-202ENST00000634512 349 ntBASIC1.22□□□□□ -2.21
ATL3Q6DD88 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
ATL3Q6DD88 RNU6-280P-201ENST00000364145 104 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.21□□□□□ -2.22
ATL3Q6DD88 RNU6-793P-201ENST00000384233 104 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 Y_RNA.490-201ENST00000384413 102 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 RNU6-541P-201ENST00000384709 110 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ATL3Q6DD88 MRPL35P1-201ENST00000404272 572 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AL356776.1-201ENST00000406574 447 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 MIR1253-201ENST00000408273 105 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 RPL37P10-201ENST00000412884 288 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AP000870.1-201ENST00000472927 406 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AC093852.1-201ENST00000503587 266 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 MTND5P5-201ENST00000503764 376 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
ATL3Q6DD88 AC134698.4-201ENST00000523451 826 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.21□□□□□ -2.22
ATL3Q6DD88 MIR5701-3-201ENST00000578890 82 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 MIR5701-1-201ENST00000585138 82 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 AC007014.2-201ENST00000615581 479 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 MIR5701-2-201ENST00000615634 82 ntBASIC1.21□□□□□ -2.22
ATL3Q6DD88 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ATL3Q6DD88 Y_RNA.6-201ENST00000362350 114 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 Y_RNA.48-201ENST00000362710 103 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 RNU6-727P-201ENST00000363592 107 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 SNX2P2-201ENST00000424553 323 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 AL135790.2-201ENST00000437701 267 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.2□□□□□ -2.22
ATL3Q6DD88 AC026782.1-201ENST00000512952 449 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 RNU1-142P-201ENST00000516682 145 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 MIR4709-201ENST00000577272 72 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 AL390123.1-201ENST00000603216 237 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 MIR6128-201ENST00000615528 109 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 MIR8070-201ENST00000616510 88 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 U6.73-201ENST00000619194 103 ntBASIC1.2□□□□□ -2.22
ATL3Q6DD88 Y_RNA.179-201ENST00000363844 90 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 Y_RNA.339-201ENST00000365325 102 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 Y_RNA.466-201ENST00000384294 113 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 RNU6-331P-201ENST00000384724 107 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 RNU1-139P-201ENST00000391307 165 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 MIR1277-201ENST00000408536 78 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 TOMM22P2-201ENST00000430735 237 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 MTND3P23-201ENST00000431980 347 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 MTND1P34-201ENST00000438556 671 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 AC103851.1-201ENST00000506833 274 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 RNU6-718P-201ENST00000516166 105 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 Y_RNA.682-201ENST00000516457 100 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 RNU1-54P-201ENST00000517181 120 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 AF235103.2-201ENST00000525753 346 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 CBX3P8-201ENST00000532412 525 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 AL359075.3-201ENST00000613288 217 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.19□□□□□ -2.22
ATL3Q6DD88 AC073869.6-201ENST00000640656 341 ntBASIC1.19□□□□□ -2.22
ATL3Q6DD88 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
ATL3Q6DD88 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
ATL3Q6DD88 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ATL3Q6DD88 Y_RNA.327-201ENST00000365201 102 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms