Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.2□□□□□ -2.6
CDC42BPAQ5VT25 AC010999.1-201ENST00000611856 324 ntBASIC-1.2□□□□□ -2.6
CDC42BPAQ5VT25 AP000676.3-201ENST00000623299 569 ntBASIC-1.2□□□□□ -2.6
CDC42BPAQ5VT25 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.2□□□□□ -2.6
CDC42BPAQ5VT25 RNU6-223P-201ENST00000362830 107 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AC010486.3-201ENST00000511602 785 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 MIR5591-201ENST00000578248 65 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AC091135.1-201ENST00000585943 307 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AP000942.4-201ENST00000604811 241 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AL354696.1-201ENST00000614652 497 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 AL136221.1-201ENST00000621449 509 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 MIR1246-201ENST00000636535 73 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 MTND5P18-201ENST00000445624 1801 ntBASIC-1.21□□□□□ -2.6
CDC42BPAQ5VT25 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 RPS3AP3-201ENST00000411933 242 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 TMEM251P1-201ENST00000503717 318 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 SNORD38.3-201ENST00000516599 73 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 RNU7-156P-201ENST00000517214 74 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 MIR4770-201ENST00000579149 58 ntBASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.22□□□□□ -2.6
CDC42BPAQ5VT25 RNU4-21P-201ENST00000362802 126 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-166P-201ENST00000384371 107 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR215-201ENST00000384858 110 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 SNORA26.5-201ENST00000391215 123 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC016831.2-201ENST00000417179 352 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC020550.1-201ENST00000447385 163 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 snoU13.16-201ENST00000459350 104 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC104629.1-201ENST00000494226 508 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MTND4P33-201ENST00000556706 766 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR3179-1-201ENST00000578940 84 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR3179-2-201ENST00000579107 84 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR3179-3-201ENST00000579566 84 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 VN1R87P-201ENST00000596706 487 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 SNORA70.25-201ENST00000612741 95 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR3179-4-201ENST00000617599 84 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-545P-201ENST00000362681 104 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-490P-201ENST00000362985 107 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 SNORD28-201ENST00000384706 75 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR516B1-201ENST00000385211 90 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR891A-201ENST00000401237 79 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AL355143.1-201ENST00000407101 841 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MTND1P21-201ENST00000412991 285 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 HIGD1AP15-201ENST00000416198 280 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC097462.1-201ENST00000514125 324 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 LARP7P2-201ENST00000575306 125 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 AC004223.4-201ENST00000612426 332 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 MIR382-201ENST00000637119 76 ntBASIC-1.23□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.376-201ENST00000365638 108 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-431P-201ENST00000383874 107 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 MIR518B-201ENST00000385127 83 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 MT-TN-201ENST00000387400 73 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AC005002.2-201ENST00000438228 269 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AC113347.3-201ENST00000509113 148 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 SNORD116-30-201ENST00000516468 85 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 MIR2115-201ENST00000516657 100 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-143P-201ENST00000516942 93 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 SNORA31.19-201ENST00000517079 126 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-86P-201ENST00000606534 107 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 AC009994.1-201ENST00000606889 253 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 U6.101-201ENST00000637707 76 ntBASIC-1.24□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-455P-201ENST00000384681 107 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 MIR525-201ENST00000384978 85 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 MCFD2P1-201ENST00000417812 300 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 MTND1P4-201ENST00000435196 415 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 RNU7-94P-201ENST00000459576 63 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 MTND3P5-201ENST00000512798 333 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 AC105417.1-201ENST00000514691 285 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 AC110760.3-202ENST00000515177 371 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 AC008521.1-201ENST00000587471 187 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 AC244669.1-204ENST00000621564 178 ntBASIC-1.25□□□□□ -2.61
CDC42BPAQ5VT25 RNU6-119P-201ENST00000364882 107 ntBASIC-1.26□□□□□ -2.61
CDC42BPAQ5VT25 MIR517B-201ENST00000385102 67 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms