Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CSTF1Q05048 Y_RNA.48-201ENST00000362710 103 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 SNORA72.1-201ENST00000363485 129 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 RNU6-784P-201ENST00000384330 106 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 RNA5SP323-201ENST00000391094 133 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.36□□□□□ -2.19
CSTF1Q05048 JTBP1-201ENST00000441314 247 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.36□□□□□ -2.19
CSTF1Q05048 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 RNU6-277P-201ENST00000516272 106 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.36□□□□□ -2.19
CSTF1Q05048 MIR4790-201ENST00000577799 79 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 AL355073.2-201ENST00000612106 557 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.36□□□□□ -2.19
CSTF1Q05048 AL078596.1-201ENST00000624856 447 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.36□□□□□ -2.19
CSTF1Q05048 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
CSTF1Q05048 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CSTF1Q05048 MIR26B-201ENST00000362251 77 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 SNORA33-201ENST00000363664 130 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 RNU6-128P-201ENST00000383976 107 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 Y_RNA.404-201ENST00000383978 102 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 RNU6-767P-201ENST00000384132 107 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 RNU6-975P-201ENST00000384296 105 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 COX6CP10-201ENST00000416832 224 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.35□□□□□ -2.19
CSTF1Q05048 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.35□□□□□ -2.19
CSTF1Q05048 RPS26P55-201ENST00000471178 356 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC134698.4-201ENST00000523451 826 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.35□□□□□ -2.19
CSTF1Q05048 AL121579.1-201ENST00000555129 305 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 MIR151B-201ENST00000584249 96 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC011712.1-201ENST00000588959 234 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.35□□□□□ -2.19
CSTF1Q05048 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 MIR6788-201ENST00000618842 66 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 AC092794.2-201ENST00000620933 563 ntBASIC1.35□□□□□ -2.19
CSTF1Q05048 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
CSTF1Q05048 RNU1-62P-201ENST00000362599 164 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 Y_RNA.72-201ENST00000362894 103 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU6-1235P-201ENST00000384559 107 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 Y_RNA.533-201ENST00000384596 114 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AL117342.1-201ENST00000404861 406 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RPS26P42-201ENST00000413485 326 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 FTH1P12-201ENST00000432137 551 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.34□□□□□ -2.19
CSTF1Q05048 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU7-34P-201ENST00000459394 64 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU6-498P-201ENST00000459468 107 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RPL26P26-201ENST00000480251 434 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RPL7P42-201ENST00000481005 679 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AC079140.2-201ENST00000506193 142 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 PRDX4P1-201ENST00000507189 574 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.34□□□□□ -2.19
CSTF1Q05048 AC026782.1-201ENST00000512952 449 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 ACA59.1-201ENST00000515966 143 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU6-875P-201ENST00000516488 106 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNU2-34P-201ENST00000516534 121 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RNA5SP481-201ENST00000516814 122 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.34□□□□□ -2.19
CSTF1Q05048 AC093027.1-201ENST00000546698 429 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 SNORA77B-201ENST00000578179 125 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 RBM11P1-201ENST00000604951 799 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 AC019193.3-201ENST00000609144 554 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 MIR6128-201ENST00000615528 109 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CSTF1Q05048 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.34□□□□□ -2.19
CSTF1Q05048 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 TPTEP1-208ENST00000636884 213 ntBASIC1.34□□□□□ -2.19
CSTF1Q05048 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
CSTF1Q05048 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CSTF1Q05048 RNU6-874P-201ENST00000362390 105 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 snoU2-30.2-201ENST00000362805 70 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 Y_RNA.70-201ENST00000362886 110 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 RNU6-727P-201ENST00000363592 107 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 Y_RNA.166-201ENST00000363730 102 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 SNORD116-29-201ENST00000384516 83 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 RNU6-541P-201ENST00000384709 110 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 MIR548J-201ENST00000408833 112 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 CST2P1-201ENST00000425770 87 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 MTND3P10-201ENST00000450967 341 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 snoU13.27-201ENST00000459278 104 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.33□□□□□ -2.2
CSTF1Q05048 Y_RNA.691-201ENST00000516611 103 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 AC105029.1-201ENST00000520250 669 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
CSTF1Q05048 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms