Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 SNORA42.1-201ENST00000363515 137 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
H3F3AP84243 MIR487A-201ENST00000385009 80 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.08□□□□□ -2.42
H3F3AP84243 AC073261.1-201ENST00000429409 121 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.08□□□□□ -2.42
H3F3AP84243 snoU109.3-201ENST00000459477 145 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.08□□□□□ -2.42
H3F3AP84243 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.08□□□□□ -2.42
H3F3AP84243 AC091133.4-201ENST00000511142 308 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 AC105417.1-201ENST00000514691 285 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 RNA5SP330-201ENST00000517096 96 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 AP001372.4-201ENST00000524889 472 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
H3F3AP84243 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.08□□□□□ -2.42
H3F3AP84243 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.08□□□□□ -2.42
H3F3AP84243 HIF1AP1-201ENST00000553642 175 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 EIF1P4-201ENST00000572664 335 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 MIR4315-1-201ENST00000636800 73 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 MIR4315-2-201ENST00000640925 73 ntBASIC-0.08□□□□□ -2.42
H3F3AP84243 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR18A-201ENST00000362310 71 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR562-201ENST00000384894 95 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR1-2-201ENST00000384961 85 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR1197-201ENST00000408818 88 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.09□□□□□ -2.42
H3F3AP84243 HSFY5P-201ENST00000453726 309 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 RNU7-167P-201ENST00000459160 62 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 AC005178.1-201ENST00000508392 440 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 RNU7-41P-201ENST00000515917 61 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MTND1P5-201ENST00000517906 940 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.09□□□□□ -2.42
H3F3AP84243 AP002004.2-201ENST00000531656 154 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 RPL21P9-201ENST00000556149 474 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR4509-3-201ENST00000578671 94 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR4509-2-201ENST00000583920 94 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 Z84480.1-201ENST00000605131 311 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 MIR4509-1-201ENST00000618224 94 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 AC078938.1-201ENST00000620993 318 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 AL008636.1-201ENST00000625038 1018 ntBASIC-0.09□□□□□ -2.42
H3F3AP84243 RNY4P34-201ENST00000364779 95 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 SNORA2B-201ENST00000384583 137 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 MIR520F-201ENST00000384824 87 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 MIR520C-201ENST00000385005 87 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 RNU6-679P-201ENST00000391003 106 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.1□□□□□ -2.43
H3F3AP84243 ZNF885P-201ENST00000420174 1098 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.1□□□□□ -2.43
H3F3AP84243 U8.21-201ENST00000459536 136 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AC091021.1-201ENST00000468051 388 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.1□□□□□ -2.43
H3F3AP84243 AC069113.3-201ENST00000521019 150 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AC093027.1-201ENST00000546698 429 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.1□□□□□ -2.43
H3F3AP84243 FGF7P1-201ENST00000582820 288 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 AC010620.1-201ENST00000601088 1102 ntBASIC-0.1□□□□□ -2.43
H3F3AP84243 SNORD114-16-201ENST00000363044 70 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 RNA5SP214-201ENST00000363378 118 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 RNU6-833P-201ENST00000363486 107 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 SNORD83.1-201ENST00000411362 77 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.11□□□□□ -2.43
H3F3AP84243 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.11□□□□□ -2.43
H3F3AP84243 SNORD65B-201ENST00000459126 73 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.11□□□□□ -2.43
H3F3AP84243 RNU7-172P-201ENST00000517125 64 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 MTND1P35-201ENST00000526739 508 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 AC104695.3-201ENST00000604052 296 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 U2.17-201ENST00000611454 95 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 MIR2909-201ENST00000617113 69 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.11□□□□□ -2.43
H3F3AP84243 AC121333.1-201ENST00000567488 2709 ntBASIC-0.11□□□□□ -2.43
H3F3AP84243 RNU6-369P-201ENST00000362515 102 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
H3F3AP84243 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.12□□□□□ -2.43
H3F3AP84243 AC005534.2-201ENST00000431047 433 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 ELOCP24-201ENST00000456370 334 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
H3F3AP84243 RNU7-138P-201ENST00000459479 64 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 AC097462.1-201ENST00000514125 324 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 MTATP6P9-201ENST00000515039 680 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 RNU6-863P-201ENST00000515989 104 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 RNU6-341P-201ENST00000516973 96 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 AK6P2-201ENST00000549020 471 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 OR5AK4P-201ENST00000635912 903 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 AC073544.1-201ENST00000600110 1595 ntBASIC-0.12□□□□□ -2.43
H3F3AP84243 RNA5SP48-201ENST00000363969 126 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 RNU6-654P-201ENST00000364373 107 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 MIR520G-201ENST00000385064 90 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 MIR520H-201ENST00000385126 88 ntBASIC-0.13□□□□□ -2.43
H3F3AP84243 RNU6-700P-201ENST00000391043 107 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms