Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-960P-201ENST00000364056 120 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AC098592.1-201ENST00000419352 333 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 RPL17P19-201ENST00000489069 552 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 SNORA31.3-201ENST00000516029 96 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 RNU6-475P-201ENST00000516073 104 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AL390123.1-201ENST00000603216 237 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AP000753.3-201ENST00000604083 169 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 SNORA25.7-201ENST00000364375 127 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 RNU6-127P-201ENST00000390897 107 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 MTCO1P5-201ENST00000433573 344 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 DEFB131D-201ENST00000526803 184 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 MIR15A-201ENST00000607334 83 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AC006441.5-201ENST00000612680 209 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AL391099.1-201ENST00000624635 187 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AC083799.1-201ENST00000366451 910 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 MIR1283-1-201ENST00000408494 87 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 AC006210.1-201ENST00000424882 111 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 POLR2KP2-201ENST00000438155 177 ntBASIC-0.51□□□□□ -2.49
PRKDCP78527 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.51□□□□□ -2.49
PRKDCP78527 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC010975.2-201ENST00000427781 588 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.52□□□□□ -2.49
PRKDCP78527 SNORA13-201ENST00000458790 133 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 RNY4-201ENST00000516507 96 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 RNU7-28P-201ENST00000516759 62 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC013828.2-201ENST00000532487 235 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.52□□□□□ -2.49
PRKDCP78527 AC087883.1-201ENST00000551882 391 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 U6.42-201ENST00000618440 107 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 U4.7-201ENST00000638126 106 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 MTND4LP14-201ENST00000429447 288 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 RNU2-56P-201ENST00000516826 190 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AP001372.4-201ENST00000524889 472 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 SNORA59B-202ENST00000578183 701 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC090897.1-201ENST00000580909 226 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC012433.1-201ENST00000588916 398 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC090186.1-201ENST00000605991 572 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC144521.1-201ENST00000607148 956 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
PRKDCP78527 MIR1298-201ENST00000408783 112 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 ELOCP21-201ENST00000412558 336 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.52□□□□□ -2.49
PRKDCP78527 RNA5SP216-201ENST00000516111 123 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC018448.1-201ENST00000552843 316 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 AC105081.1-201ENST00000617727 106 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 MIR6828-201ENST00000636181 60 ntBASIC-0.52□□□□□ -2.49
PRKDCP78527 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
PRKDCP78527 AL359634.1-202ENST00000404721 284 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.53□□□□□ -2.49
PRKDCP78527 AC012467.1-201ENST00000607740 256 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC026585.1-201ENST00000619582 524 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AL512326.2-201ENST00000426359 151 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC007969.2-201ENST00000441891 191 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.53□□□□□ -2.49
PRKDCP78527 RNU4-49P-201ENST00000516080 140 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 MIR548AD-201ENST00000584780 82 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 BX119904.4-201ENST00000424402 301 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC015818.7-201ENST00000428754 109 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 AC087499.7-201ENST00000441958 109 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 RNU6-58P-201ENST00000517143 103 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 VN1R87P-201ENST00000596706 487 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 U7.6-201ENST00000610841 64 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 MIR499B-201ENST00000636498 73 ntBASIC-0.53□□□□□ -2.49
PRKDCP78527 MIR217-201ENST00000384817 110 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 MIR548H2-201ENST00000408874 88 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 AC046134.1-201ENST00000514454 666 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.53□□□□□ -2.5
PRKDCP78527 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.53□□□□□ -2.5
PRKDCP78527 AL512347.1-201ENST00000566420 503 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 uc_338.28-201ENST00000612082 187 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 AC112204.3-201ENST00000623822 332 ntBASIC-0.53□□□□□ -2.5
PRKDCP78527 RNU6-983P-201ENST00000516004 103 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 RNU6-760P-201ENST00000516078 97 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.54□□□□□ -2.5
PRKDCP78527 AC008752.3-201ENST00000588113 712 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC068790.2-201ENST00000602601 557 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC133794.1-201ENST00000602731 914 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AP001033.2-201ENST00000609701 1003 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC122133.1-201ENST00000613964 233 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC005592.1-201ENST00000566527 1640 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 RNU6-545P-201ENST00000362681 104 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 SNORA22B-201ENST00000383876 138 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 MTCO1P17-201ENST00000411522 491 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.54□□□□□ -2.5
PRKDCP78527 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 MIR4771-2-201ENST00000577758 74 ntBASIC-0.54□□□□□ -2.5
PRKDCP78527 MIR4742-201ENST00000581069 85 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 297.8 ms