Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNA5SP148-201ENST00000516527 94 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 AL355297.2-201ENST00000604792 129 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 AC037487.3-201ENST00000606668 112 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 AL442067.1-201ENST00000613261 223 ntBASIC2.17□□□□□ -2.06
SEC61A1P61619 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SEC61A1P61619 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU4-82P-201ENST00000362443 140 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 Y_RNA.76-201ENST00000362931 109 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU4-80P-201ENST00000363200 141 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU6-740P-201ENST00000364734 105 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU6-326P-201ENST00000365480 107 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 MIR95-201ENST00000385072 81 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU2-63P-201ENST00000410792 194 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 AL390729.2-201ENST00000416137 156 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 AC018868.1-201ENST00000491307 315 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 AC091959.1-201ENST00000495857 238 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
SEC61A1P61619 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.16□□□□□ -2.06
SEC61A1P61619 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.16□□□□□ -2.06
SEC61A1P61619 RNU6-138P-201ENST00000515952 107 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
SEC61A1P61619 DEFB117-201ENST00000602356 141 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 AL590240.4-201ENST00000616908 390 ntBASIC2.16□□□□□ -2.06
SEC61A1P61619 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SEC61A1P61619 AC007336.1-201ENST00000576365 3828 ntBASIC2.15□□□□□ -2.06
SEC61A1P61619 MIR410-201ENST00000362222 80 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU6-324P-201ENST00000363957 106 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU6-1264P-201ENST00000383891 107 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU6-1310P-201ENST00000384153 107 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU6-514P-201ENST00000384208 107 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU6-662P-201ENST00000384253 104 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU2-54P-201ENST00000410299 190 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RNU2-32P-201ENST00000411193 191 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 AC009963.1-201ENST00000417265 157 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.15□□□□□ -2.07
SEC61A1P61619 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.15□□□□□ -2.07
SEC61A1P61619 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.15□□□□□ -2.07
SEC61A1P61619 RNA5SP282-201ENST00000516355 108 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 SNORA48.11-201ENST00000517015 89 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 AC130289.1-201ENST00000577321 73 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 BX284668.6-201ENST00000606899 438 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 MIR1248-201ENST00000629190 106 ntBASIC2.15□□□□□ -2.07
SEC61A1P61619 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.14□□□□□ -2.07
SEC61A1P61619 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.14□□□□□ -2.07
SEC61A1P61619 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
SEC61A1P61619 Y_RNA.329-201ENST00000365209 107 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 RNU6-234P-201ENST00000365229 104 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 RNA5SP320-201ENST00000516263 124 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 RNU2-12P-201ENST00000517216 168 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.14□□□□□ -2.07
SEC61A1P61619 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
SEC61A1P61619 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SEC61A1P61619 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.14□□□□□ -2.07
SEC61A1P61619 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.14□□□□□ -2.07
SEC61A1P61619 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SEC61A1P61619 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SEC61A1P61619 Y_RNA.274-201ENST00000364714 101 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 U3.40-201ENST00000408706 208 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 AC016717.1-201ENST00000448918 286 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.13□□□□□ -2.07
SEC61A1P61619 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
SEC61A1P61619 SNORD116-28-201ENST00000516123 91 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 RPPH1-2P-201ENST00000516688 293 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.13□□□□□ -2.07
SEC61A1P61619 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.13□□□□□ -2.07
SEC61A1P61619 AC006380.1-201ENST00000603598 186 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 AC005828.6-201ENST00000606610 232 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 U4.3-201ENST00000621047 82 ntBASIC2.13□□□□□ -2.07
SEC61A1P61619 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SEC61A1P61619 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.12□□□□□ -2.07
SEC61A1P61619 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.12□□□□□ -2.07
SEC61A1P61619 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-200P-201ENST00000364743 107 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNA5SP126-201ENST00000365092 109 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-546P-201ENST00000383991 107 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-1289P-201ENST00000384431 106 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SEC61A1P61619 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
SEC61A1P61619 AL513328.1-201ENST00000446460 224 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.12□□□□□ -2.07
SEC61A1P61619 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-436P-201ENST00000516171 114 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-191P-201ENST00000516295 94 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 RNU6-667P-201ENST00000517186 102 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AC109329.2-201ENST00000519658 482 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AL512605.2-201ENST00000592972 256 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AL162424.1-201ENST00000602325 221 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 AC009779.6-201ENST00000603972 165 ntBASIC2.12□□□□□ -2.07
SEC61A1P61619 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms