Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.212-201ENST00000364177 102 ntBASIC0.94□□□□□ -2.26
VSX2P58304 Y_RNA.319-201ENST00000365138 92 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-245P-201ENST00000384020 107 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-1065P-201ENST00000384513 106 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-306P-201ENST00000384617 107 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MIR515-2-201ENST00000384883 83 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MIR515-1-201ENST00000384884 83 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MIR489-201ENST00000384923 84 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-159P-201ENST00000391080 106 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MIR320B2-201ENST00000408479 138 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU2-16P-201ENST00000410712 136 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MTCO2P7-201ENST00000446518 666 ntBASIC0.94□□□□□ -2.26
VSX2P58304 AC074290.1-201ENST00000448883 135 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RN7SKP88-201ENST00000516847 250 ntBASIC0.94□□□□□ -2.26
VSX2P58304 AC027419.1-201ENST00000522976 328 ntBASIC0.94□□□□□ -2.26
VSX2P58304 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
VSX2P58304 AC011604.1-201ENST00000545978 196 ntBASIC0.94□□□□□ -2.26
VSX2P58304 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.94□□□□□ -2.26
VSX2P58304 AC019193.3-201ENST00000609144 554 ntBASIC0.94□□□□□ -2.26
VSX2P58304 7SK.8-201ENST00000612110 250 ntBASIC0.94□□□□□ -2.26
VSX2P58304 AL359075.3-201ENST00000613288 217 ntBASIC0.94□□□□□ -2.26
VSX2P58304 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.94□□□□□ -2.26
VSX2P58304 7SK.11-201ENST00000615477 250 ntBASIC0.94□□□□□ -2.26
VSX2P58304 U6.73-201ENST00000619194 103 ntBASIC0.94□□□□□ -2.26
VSX2P58304 MIR8065-201ENST00000620577 100 ntBASIC0.94□□□□□ -2.26
VSX2P58304 7SK.13-201ENST00000622040 250 ntBASIC0.94□□□□□ -2.26
VSX2P58304 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.94□□□□□ -2.26
VSX2P58304 RNU6-1123P-201ENST00000362347 106 ntBASIC0.93□□□□□ -2.26
VSX2P58304 Y_RNA.135-201ENST00000363439 95 ntBASIC0.93□□□□□ -2.26
VSX2P58304 RNY3P3-201ENST00000363816 102 ntBASIC0.93□□□□□ -2.26
VSX2P58304 SNORD115-32-201ENST00000364079 82 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.93□□□□□ -2.26
VSX2P58304 RNU6-1148P-201ENST00000410992 104 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.93□□□□□ -2.26
VSX2P58304 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.93□□□□□ -2.26
VSX2P58304 MIR5696-201ENST00000578474 85 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AL021879.1-201ENST00000611756 288 ntBASIC0.93□□□□□ -2.26
VSX2P58304 RMST_2.1-201ENST00000617263 136 ntBASIC0.93□□□□□ -2.26
VSX2P58304 MIR6734-201ENST00000621166 68 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AC106754.2-201ENST00000623006 233 ntBASIC0.93□□□□□ -2.26
VSX2P58304 MIR1321-201ENST00000637766 79 ntBASIC0.93□□□□□ -2.26
VSX2P58304 AC018630.2-201ENST00000534866 2403 ntBASIC0.93□□□□□ -2.26
VSX2P58304 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
VSX2P58304 U3.8-201ENST00000363675 217 ntBASIC0.92□□□□□ -2.26
VSX2P58304 SNORD116-11-201ENST00000383882 92 ntBASIC0.92□□□□□ -2.26
VSX2P58304 RNU6-17P-201ENST00000384245 107 ntBASIC0.92□□□□□ -2.26
VSX2P58304 RNU6-18P-201ENST00000384527 107 ntBASIC0.92□□□□□ -2.26
VSX2P58304 Y_RNA.533-201ENST00000384596 114 ntBASIC0.92□□□□□ -2.26
VSX2P58304 MIR153-2-201ENST00000385225 87 ntBASIC0.92□□□□□ -2.26
VSX2P58304 AC008134.1-201ENST00000420943 193 ntBASIC0.92□□□□□ -2.26
VSX2P58304 MTND1P1-201ENST00000445453 368 ntBASIC0.92□□□□□ -2.26
VSX2P58304 SNORD65B-201ENST00000459126 73 ntBASIC0.92□□□□□ -2.26
VSX2P58304 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
VSX2P58304 AC092991.1-201ENST00000477176 376 ntBASIC0.92□□□□□ -2.26
VSX2P58304 AC091144.1-201ENST00000519573 138 ntBASIC0.92□□□□□ -2.26
VSX2P58304 NBR2-204ENST00000587322 63 ntBASIC0.92□□□□□ -2.26
VSX2P58304 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.92□□□□□ -2.26
VSX2P58304 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VSX2P58304 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.92□□□□□ -2.26
VSX2P58304 RNU6-137P-201ENST00000363680 108 ntBASIC0.91□□□□□ -2.26
VSX2P58304 RNU6-1059P-201ENST00000363752 98 ntBASIC0.91□□□□□ -2.26
VSX2P58304 Y_RNA.517-201ENST00000384551 106 ntBASIC0.91□□□□□ -2.26
VSX2P58304 Y_RNA.530-201ENST00000384587 101 ntBASIC0.91□□□□□ -2.26
VSX2P58304 Y_RNA.559-201ENST00000384686 107 ntBASIC0.91□□□□□ -2.26
VSX2P58304 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
VSX2P58304 ZNF885P-201ENST00000420174 1098 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.91□□□□□ -2.26
VSX2P58304 AC245047.3-201ENST00000429428 127 ntBASIC0.91□□□□□ -2.26
VSX2P58304 PGBD4P5-201ENST00000445958 426 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AP000870.1-201ENST00000472927 406 ntBASIC0.91□□□□□ -2.26
VSX2P58304 TRBVA-201ENST00000498804 316 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.91□□□□□ -2.26
VSX2P58304 RNU7-99P-201ENST00000516271 62 ntBASIC0.91□□□□□ -2.26
VSX2P58304 RNU6-314P-201ENST00000516574 104 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.91□□□□□ -2.26
VSX2P58304 CBX3P8-201ENST00000532412 525 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AL137100.2-201ENST00000555786 315 ntBASIC0.91□□□□□ -2.26
VSX2P58304 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.91□□□□□ -2.26
VSX2P58304 AC090617.10-201ENST00000624308 134 ntBASIC0.91□□□□□ -2.26
VSX2P58304 Y_RNA.48-201ENST00000362710 103 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.194-201ENST00000363985 102 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.405-201ENST00000383979 100 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.414-201ENST00000384011 101 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.451-201ENST00000384200 100 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.524-201ENST00000384564 100 ntBASIC0.9□□□□□ -2.27
VSX2P58304 Y_RNA.561-201ENST00000384694 100 ntBASIC0.9□□□□□ -2.27
VSX2P58304 RNU6-541P-201ENST00000384709 110 ntBASIC0.9□□□□□ -2.27
VSX2P58304 MIR10B-201ENST00000385011 110 ntBASIC0.9□□□□□ -2.27
VSX2P58304 MRPL42P3-201ENST00000401492 326 ntBASIC0.9□□□□□ -2.27
VSX2P58304 RN7SKP200-201ENST00000410564 320 ntBASIC0.9□□□□□ -2.27
VSX2P58304 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.9□□□□□ -2.27
VSX2P58304 MTATP6P13-201ENST00000438531 667 ntBASIC0.9□□□□□ -2.27
VSX2P58304 MTND4P18-201ENST00000447010 465 ntBASIC0.9□□□□□ -2.27
VSX2P58304 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.9□□□□□ -2.27
VSX2P58304 ACA59.1-201ENST00000515966 143 ntBASIC0.9□□□□□ -2.27
VSX2P58304 RNU6-1088P-201ENST00000516850 104 ntBASIC0.9□□□□□ -2.27
VSX2P58304 RNU6-273P-201ENST00000516937 96 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms