Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.48□□□□□ -2.01
COPAP53621 NDUFB4P10-201ENST00000452541 359 ntBASIC2.48□□□□□ -2.01
COPAP53621 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
COPAP53621 AC025465.3-201ENST00000510570 311 ntBASIC2.48□□□□□ -2.01
COPAP53621 MIR4529-201ENST00000578110 78 ntBASIC2.48□□□□□ -2.01
COPAP53621 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.48□□□□□ -2.01
COPAP53621 AC007229.1-201ENST00000590455 412 ntBASIC2.48□□□□□ -2.01
COPAP53621 AC011373.1-201ENST00000607270 237 ntBASIC2.48□□□□□ -2.01
COPAP53621 AC022202.1-201ENST00000613515 211 ntBASIC2.48□□□□□ -2.01
COPAP53621 MIR6715A-201ENST00000615929 79 ntBASIC2.48□□□□□ -2.01
COPAP53621 U4.1-201ENST00000620349 87 ntBASIC2.48□□□□□ -2.01
COPAP53621 MIR3674-201ENST00000636576 68 ntBASIC2.48□□□□□ -2.01
COPAP53621 Y_RNA.26-201ENST00000362539 101 ntBASIC2.47□□□□□ -2.01
COPAP53621 Y_RNA.105-201ENST00000363182 111 ntBASIC2.47□□□□□ -2.01
COPAP53621 SNORD114-30-201ENST00000364448 72 ntBASIC2.47□□□□□ -2.01
COPAP53621 Y_RNA.332-201ENST00000365271 113 ntBASIC2.47□□□□□ -2.01
COPAP53621 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
COPAP53621 RNU6-418P-201ENST00000384035 107 ntBASIC2.47□□□□□ -2.01
COPAP53621 RNU6-21P-201ENST00000384710 107 ntBASIC2.47□□□□□ -2.01
COPAP53621 RNU6-121P-201ENST00000410525 99 ntBASIC2.47□□□□□ -2.01
COPAP53621 EDDM3CP-201ENST00000415977 425 ntBASIC2.47□□□□□ -2.01
COPAP53621 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
COPAP53621 TOMM22P2-201ENST00000430735 237 ntBASIC2.47□□□□□ -2.01
COPAP53621 AC245102.2-201ENST00000448956 180 ntBASIC2.47□□□□□ -2.01
COPAP53621 YWHAEP4-201ENST00000505390 198 ntBASIC2.47□□□□□ -2.01
COPAP53621 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
COPAP53621 RNU7-110P-201ENST00000516891 62 ntBASIC2.47□□□□□ -2.01
COPAP53621 MIR4503-201ENST00000582187 83 ntBASIC2.47□□□□□ -2.01
COPAP53621 MIR3149-201ENST00000584629 83 ntBASIC2.47□□□□□ -2.01
COPAP53621 AC104984.5-201ENST00000586878 94 ntBASIC2.47□□□□□ -2.01
COPAP53621 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.47□□□□□ -2.01
COPAP53621 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
COPAP53621 SNORD115-3-201ENST00000363100 82 ntBASIC2.46□□□□□ -2.02
COPAP53621 U8.2-201ENST00000363156 134 ntBASIC2.46□□□□□ -2.02
COPAP53621 SNORD113-8-201ENST00000363497 74 ntBASIC2.46□□□□□ -2.02
COPAP53621 Y_RNA.452-201ENST00000384202 108 ntBASIC2.46□□□□□ -2.02
COPAP53621 Y_RNA.461-201ENST00000384263 103 ntBASIC2.46□□□□□ -2.02
COPAP53621 RNU6-574P-201ENST00000384265 107 ntBASIC2.46□□□□□ -2.02
COPAP53621 Y_RNA.570-201ENST00000384750 101 ntBASIC2.46□□□□□ -2.02
COPAP53621 MIR548B-201ENST00000385247 97 ntBASIC2.46□□□□□ -2.02
COPAP53621 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
COPAP53621 Y_RNA.602-201ENST00000410535 92 ntBASIC2.46□□□□□ -2.02
COPAP53621 RPL21P38-201ENST00000418090 167 ntBASIC2.46□□□□□ -2.02
COPAP53621 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
COPAP53621 AC016717.1-201ENST00000448918 286 ntBASIC2.46□□□□□ -2.02
COPAP53621 RNU7-57P-201ENST00000459540 60 ntBASIC2.46□□□□□ -2.02
COPAP53621 MIR4423-201ENST00000580922 80 ntBASIC2.46□□□□□ -2.02
COPAP53621 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.46□□□□□ -2.02
COPAP53621 AL109918.3-201ENST00000603072 338 ntBASIC2.46□□□□□ -2.02
COPAP53621 AC103810.6-201ENST00000606708 136 ntBASIC2.46□□□□□ -2.02
COPAP53621 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.46□□□□□ -2.02
COPAP53621 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
COPAP53621 MIR410-201ENST00000362222 80 ntBASIC2.45□□□□□ -2.02
COPAP53621 Y_RNA.99-201ENST00000363138 105 ntBASIC2.45□□□□□ -2.02
COPAP53621 RNU6-702P-201ENST00000364982 107 ntBASIC2.45□□□□□ -2.02
COPAP53621 RNU6-1175P-201ENST00000365200 107 ntBASIC2.45□□□□□ -2.02
COPAP53621 RNU6-975P-201ENST00000384296 105 ntBASIC2.45□□□□□ -2.02
COPAP53621 SNORD14D-201ENST00000384390 87 ntBASIC2.45□□□□□ -2.02
COPAP53621 RPL23AP36-201ENST00000413895 458 ntBASIC2.45□□□□□ -2.02
COPAP53621 AC139712.2-201ENST00000424302 339 ntBASIC2.45□□□□□ -2.02
COPAP53621 SEPT14P8-201ENST00000508026 178 ntBASIC2.45□□□□□ -2.02
COPAP53621 RNU6-948P-201ENST00000516374 107 ntBASIC2.45□□□□□ -2.02
COPAP53621 RNU6-570P-201ENST00000517051 105 ntBASIC2.45□□□□□ -2.02
COPAP53621 SNORA31.25-201ENST00000517242 134 ntBASIC2.45□□□□□ -2.02
COPAP53621 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.45□□□□□ -2.02
COPAP53621 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.45□□□□□ -2.02
COPAP53621 AC004817.2-201ENST00000561794 651 ntBASIC2.45□□□□□ -2.02
COPAP53621 AL031274.2-201ENST00000599419 203 ntBASIC2.45□□□□□ -2.02
COPAP53621 SNORD113-5-201ENST00000607261 78 ntBASIC2.45□□□□□ -2.02
COPAP53621 AC004467.1-201ENST00000615678 330 ntBASIC2.45□□□□□ -2.02
COPAP53621 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.45□□□□□ -2.02
COPAP53621 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.45□□□□□ -2.02
COPAP53621 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COPAP53621 AC007336.1-201ENST00000576365 3828 ntBASIC2.44□□□□□ -2.02
COPAP53621 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
COPAP53621 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COPAP53621 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COPAP53621 AC010531.2-201ENST00000465012 153 ntBASIC2.44□□□□□ -2.02
COPAP53621 AC098869.1-201ENST00000481627 292 ntBASIC2.44□□□□□ -2.02
COPAP53621 AC046143.2-201ENST00000609789 160 ntBASIC2.44□□□□□ -2.02
COPAP53621 AC091932.3-201ENST00000624223 323 ntBASIC2.44□□□□□ -2.02
COPAP53621 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COPAP53621 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
COPAP53621 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COPAP53621 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNU4-90P-201ENST00000362773 141 ntBASIC2.43□□□□□ -2.02
COPAP53621 Y_RNA.331-201ENST00000365267 102 ntBASIC2.43□□□□□ -2.02
COPAP53621 Y_RNA.376-201ENST00000365638 108 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNU4-30P-201ENST00000410245 143 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
COPAP53621 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
COPAP53621 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNU6-57P-201ENST00000411348 103 ntBASIC2.43□□□□□ -2.02
COPAP53621 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.43□□□□□ -2.02
COPAP53621 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.43□□□□□ -2.02
COPAP53621 TRBVB-201ENST00000477100 408 ntBASIC2.43□□□□□ -2.02
COPAP53621 RPS29P21-201ENST00000496272 170 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNA5SP137-201ENST00000516833 135 ntBASIC2.43□□□□□ -2.02
COPAP53621 RNU2-19P-201ENST00000517288 84 ntBASIC2.43□□□□□ -2.02
COPAP53621 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms