Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU4-9P-201ENST00000364951 139 ntBASIC1.26□□□□□ -2.21
RFC4P35249 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
RFC4P35249 MIR532-201ENST00000385025 91 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RNA5SP504-201ENST00000410676 117 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RPS27P16-201ENST00000425758 201 ntBASIC1.26□□□□□ -2.21
RFC4P35249 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.26□□□□□ -2.21
RFC4P35249 RNU6-1132P-201ENST00000459214 107 ntBASIC1.26□□□□□ -2.21
RFC4P35249 AL163195.1-201ENST00000496941 348 ntBASIC1.26□□□□□ -2.21
RFC4P35249 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.26□□□□□ -2.21
RFC4P35249 SNORA25.14-201ENST00000516481 132 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RNU6-1088P-201ENST00000516850 104 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RNU6-1314P-201ENST00000517139 104 ntBASIC1.26□□□□□ -2.21
RFC4P35249 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.26□□□□□ -2.21
RFC4P35249 UBL5P4-201ENST00000562584 236 ntBASIC1.26□□□□□ -2.21
RFC4P35249 EIF1P4-201ENST00000572664 335 ntBASIC1.26□□□□□ -2.21
RFC4P35249 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.26□□□□□ -2.21
RFC4P35249 AL359697.1-201ENST00000624879 587 ntBASIC1.26□□□□□ -2.21
RFC4P35249 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.26□□□□□ -2.21
RFC4P35249 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RFC4P35249 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU6-1059P-201ENST00000363752 98 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU1-133P-201ENST00000364867 167 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU6-534P-201ENST00000364877 106 ntBASIC1.25□□□□□ -2.21
RFC4P35249 Y_RNA.295-201ENST00000364918 102 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU6-831P-201ENST00000384548 107 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNY1P4-201ENST00000384595 115 ntBASIC1.25□□□□□ -2.21
RFC4P35249 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RFC4P35249 SNORD115-47-201ENST00000391226 86 ntBASIC1.25□□□□□ -2.21
RFC4P35249 MRPL35P1-201ENST00000404272 572 ntBASIC1.25□□□□□ -2.21
RFC4P35249 MIR1253-201ENST00000408273 105 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU6-373P-201ENST00000411247 98 ntBASIC1.25□□□□□ -2.21
RFC4P35249 AC016909.1-201ENST00000415916 166 ntBASIC1.25□□□□□ -2.21
RFC4P35249 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.25□□□□□ -2.21
RFC4P35249 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.25□□□□□ -2.21
RFC4P35249 MTATP6P13-201ENST00000438531 667 ntBASIC1.25□□□□□ -2.21
RFC4P35249 DAP3P1-201ENST00000441522 278 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RPS27P1-201ENST00000450552 247 ntBASIC1.25□□□□□ -2.21
RFC4P35249 AC092989.1-201ENST00000481235 277 ntBASIC1.25□□□□□ -2.21
RFC4P35249 AC103851.1-201ENST00000506833 274 ntBASIC1.25□□□□□ -2.21
RFC4P35249 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.25□□□□□ -2.21
RFC4P35249 AL353149.1-201ENST00000610667 244 ntBASIC1.25□□□□□ -2.21
RFC4P35249 RNU6-873P-201ENST00000363833 107 ntBASIC1.24□□□□□ -2.21
RFC4P35249 Y_RNA.319-201ENST00000365138 92 ntBASIC1.24□□□□□ -2.21
RFC4P35249 Y_RNA.533-201ENST00000384596 114 ntBASIC1.24□□□□□ -2.21
RFC4P35249 RNU6-541P-201ENST00000384709 110 ntBASIC1.24□□□□□ -2.21
RFC4P35249 MIR548F1-201ENST00000408667 84 ntBASIC1.24□□□□□ -2.21
RFC4P35249 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.24□□□□□ -2.21
RFC4P35249 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.24□□□□□ -2.21
RFC4P35249 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.24□□□□□ -2.21
RFC4P35249 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC4P35249 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.24□□□□□ -2.21
RFC4P35249 RNU6-344P-201ENST00000516635 111 ntBASIC1.24□□□□□ -2.21
RFC4P35249 RNA5SP54-201ENST00000516951 92 ntBASIC1.24□□□□□ -2.21
RFC4P35249 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.24□□□□□ -2.21
RFC4P35249 AC027288.2-201ENST00000553028 243 ntBASIC1.24□□□□□ -2.21
RFC4P35249 SNORD11B-201ENST00000607707 90 ntBASIC1.24□□□□□ -2.21
RFC4P35249 AC009248.2-201ENST00000619826 254 ntBASIC1.24□□□□□ -2.21
RFC4P35249 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.24□□□□□ -2.21
RFC4P35249 snoZ196.1-201ENST00000625269 89 ntBASIC1.24□□□□□ -2.21
RFC4P35249 MIR3662-201ENST00000637030 95 ntBASIC1.24□□□□□ -2.21
RFC4P35249 Y_RNA.48-201ENST00000362710 103 ntBASIC1.23□□□□□ -2.21
RFC4P35249 SNORD115-32-201ENST00000364079 82 ntBASIC1.23□□□□□ -2.21
RFC4P35249 Y_RNA.453-201ENST00000384223 109 ntBASIC1.23□□□□□ -2.21
RFC4P35249 SNORD116-4-201ENST00000384733 96 ntBASIC1.23□□□□□ -2.21
RFC4P35249 MIR216A-201ENST00000385063 110 ntBASIC1.23□□□□□ -2.21
RFC4P35249 MIR153-2-201ENST00000385225 87 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AL161935.2-201ENST00000414627 60 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
RFC4P35249 snoU13.27-201ENST00000459278 104 ntBASIC1.23□□□□□ -2.21
RFC4P35249 RNU6-864P-201ENST00000516256 108 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.23□□□□□ -2.21
RFC4P35249 MIR4273-201ENST00000582824 84 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AC008873.1-201ENST00000625051 138 ntBASIC1.23□□□□□ -2.21
RFC4P35249 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
RFC4P35249 MTND4P12-201ENST00000498999 1377 ntBASIC1.22□□□□□ -2.21
RFC4P35249 SNORD115-8-201ENST00000363856 82 ntBASIC1.22□□□□□ -2.21
RFC4P35249 SNORD115-38-201ENST00000365037 82 ntBASIC1.22□□□□□ -2.21
RFC4P35249 Y_RNA.415-201ENST00000384012 112 ntBASIC1.22□□□□□ -2.21
RFC4P35249 RNU6-1215P-201ENST00000384441 102 ntBASIC1.22□□□□□ -2.21
RFC4P35249 RNA5SP109-201ENST00000391010 116 ntBASIC1.22□□□□□ -2.21
RFC4P35249 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
RFC4P35249 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC4P35249 EIF1P1-201ENST00000421436 341 ntBASIC1.22□□□□□ -2.21
RFC4P35249 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC4P35249 USP9YP30-201ENST00000430729 455 ntBASIC1.22□□□□□ -2.21
RFC4P35249 AC069257.2-201ENST00000441819 155 ntBASIC1.22□□□□□ -2.21
RFC4P35249 RNU6-1146P-201ENST00000516282 102 ntBASIC1.22□□□□□ -2.21
RFC4P35249 RNA5SP454-201ENST00000517231 127 ntBASIC1.22□□□□□ -2.21
RFC4P35249 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
RFC4P35249 CBX3P8-201ENST00000532412 525 ntBASIC1.22□□□□□ -2.21
RFC4P35249 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
RFC4P35249 MIR5696-201ENST00000578474 85 ntBASIC1.22□□□□□ -2.21
RFC4P35249 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
RFC4P35249 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
RFC4P35249 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RFC4P35249 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
RFC4P35249 RNU6-245P-201ENST00000384020 107 ntBASIC1.21□□□□□ -2.22
RFC4P35249 RNA5SP323-201ENST00000391094 133 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms