Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 Y_RNA.673-201ENST00000516306 88 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AK6P2-201ENST00000549020 471 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AL355802.3-201ENST00000607571 545 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
PTPN6P29350 Y_RNA.184-201ENST00000363884 108 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AC004965.1-201ENST00000413033 213 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AL135790.2-201ENST00000437701 267 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.31□□□□□ -2.2
PTPN6P29350 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.31□□□□□ -2.2
PTPN6P29350 RNU6-329P-201ENST00000459618 107 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AC011352.1-201ENST00000512300 793 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 RNU6-1114P-201ENST00000516022 107 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 RNU6-107P-201ENST00000516643 102 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 CBX3P8-201ENST00000532412 525 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 APOOP3-201ENST00000536787 586 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AC022432.1-201ENST00000595739 310 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 MZT1P2-201ENST00000604387 248 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AC002553.4-201ENST00000616896 331 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
PTPN6P29350 AL391987.6-201ENST00000305671 199 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
PTPN6P29350 EIF1P1-201ENST00000421436 341 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 MTND5P5-201ENST00000503764 376 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 Y_RNA.683-201ENST00000516508 93 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.3□□□□□ -2.2
PTPN6P29350 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
PTPN6P29350 RNU6-222P-201ENST00000362438 107 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 MIR513A1-201ENST00000385138 129 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.29□□□□□ -2.2
PTPN6P29350 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.29□□□□□ -2.2
PTPN6P29350 AC005002.2-201ENST00000438228 269 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 MTND4P18-201ENST00000447010 465 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 RNU6-1016P-201ENST00000516689 94 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AF235103.2-201ENST00000525753 346 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AL442163.3-201ENST00000554110 156 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
PTPN6P29350 MIR4742-201ENST00000581069 85 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC018462.2-201ENST00000605375 395 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC040896.1-201ENST00000613819 479 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC007014.2-201ENST00000615581 479 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 U6.108-201ENST00000637764 58 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 AC068137.4-201ENST00000638485 296 ntBASIC1.29□□□□□ -2.2
PTPN6P29350 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTPN6P29350 Y_RNA.2-201ENST00000362330 96 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 Y_RNA.106-201ENST00000363189 100 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 RNU6-281P-201ENST00000384212 103 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 RNU1-139P-201ENST00000391307 165 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 MIR1287-201ENST00000408492 90 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AC010154.1-201ENST00000425857 269 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AL606517.2-201ENST00000442855 241 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 RPS27P1-201ENST00000450552 247 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.28□□□□□ -2.2
PTPN6P29350 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.28□□□□□ -2.2
PTPN6P29350 AC091144.1-201ENST00000519573 138 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AC093023.1-201ENST00000547375 507 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AL121579.1-201ENST00000555129 305 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 FRG2DP-202ENST00000566967 323 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 MIR4421-201ENST00000578133 69 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.28□□□□□ -2.2
PTPN6P29350 U6.73-201ENST00000619194 103 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.28□□□□□ -2.2
PTPN6P29350 AL133216.2-202ENST00000634512 349 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 AC027514.1-201ENST00000588561 1603 ntBASIC1.28□□□□□ -2.2
PTPN6P29350 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.21
PTPN6P29350 MTND5P16-201ENST00000460269 1703 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RNU6-1123P-201ENST00000362347 106 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RNU6-593P-201ENST00000364716 112 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 Y_RNA.473-201ENST00000384333 102 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RNU6-700P-201ENST00000391043 107 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 MIR548F5-201ENST00000408421 86 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RN7SKP200-201ENST00000410564 320 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 FCF1P9-201ENST00000412546 282 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 MTND3P8-201ENST00000412909 339 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.27□□□□□ -2.21
PTPN6P29350 SNX2P2-201ENST00000424553 323 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
PTPN6P29350 AC245047.3-201ENST00000429428 127 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 RPS3AP52-201ENST00000435639 297 ntBASIC1.27□□□□□ -2.21
PTPN6P29350 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.27□□□□□ -2.21
PTPN6P29350 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.27□□□□□ -2.21
PTPN6P29350 AC026782.1-201ENST00000512952 449 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms