Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MIR153-2-201ENST00000385225 87 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 AC004941.2-201ENST00000427009 228 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 MTND3P16-201ENST00000452205 344 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.72□□□□□ -2.29
ERCC1P07992 RNU6-917P-201ENST00000516294 104 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.72□□□□□ -2.29
ERCC1P07992 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 AC006435.5-201ENST00000624486 112 ntBASIC0.72□□□□□ -2.29
ERCC1P07992 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU6-727P-201ENST00000363592 107 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU5F-3P-201ENST00000363767 117 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU6-969P-201ENST00000383900 105 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU6-128P-201ENST00000383976 107 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU6-424P-201ENST00000384367 105 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 RNU6-790P-201ENST00000384479 105 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 MIR514A2-201ENST00000385131 88 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 MIR514A3-201ENST00000385132 88 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 CALM2P3-201ENST00000400429 449 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.71□□□□□ -2.3
ERCC1P07992 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 Z82188.1-201ENST00000436709 154 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.71□□□□□ -2.3
ERCC1P07992 MRPS10P1-201ENST00000448483 130 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 TPT1P7-201ENST00000458300 517 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.71□□□□□ -2.3
ERCC1P07992 AC027288.2-201ENST00000553028 243 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.71□□□□□ -2.3
ERCC1P07992 RMST_2.1-201ENST00000617263 136 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.71□□□□□ -2.3
ERCC1P07992 MIR6767-201ENST00000637302 66 ntBASIC0.71□□□□□ -2.3
ERCC1P07992 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ERCC1P07992 RNU6-280P-201ENST00000364145 104 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 Y_RNA.265-201ENST00000364677 108 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ERCC1P07992 RNU6-793P-201ENST00000384233 104 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.7□□□□□ -2.3
ERCC1P07992 RNU7-187P-201ENST00000458985 68 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 SNORD65B-201ENST00000459126 73 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 RPS26P48-201ENST00000491713 339 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.7□□□□□ -2.3
ERCC1P07992 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 MIR5000-201ENST00000577717 103 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 MIR6079-201ENST00000635807 62 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 AC068137.4-201ENST00000638485 296 ntBASIC0.7□□□□□ -2.3
ERCC1P07992 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ERCC1P07992 Y_RNA.100-201ENST00000363141 102 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 Y_RNA.481-201ENST00000384373 102 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 RNU6-541P-201ENST00000384709 110 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AL445305.1-201ENST00000432577 575 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 MTCO3P18-201ENST00000440206 761 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 MTND4P18-201ENST00000447010 465 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AC091179.3-201ENST00000474761 144 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 RPS27P22-201ENST00000478056 241 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 MTCO2P30-201ENST00000503662 364 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AC022493.2-201ENST00000506122 481 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 RNU7-28P-201ENST00000516759 62 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.69□□□□□ -2.3
ERCC1P07992 AC023157.2-201ENST00000540596 141 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.69□□□□□ -2.3
ERCC1P07992 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.69□□□□□ -2.3
ERCC1P07992 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AC010620.1-201ENST00000601088 1102 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AC121247.2-201ENST00000604776 136 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 AL158209.2-201ENST00000619266 216 ntBASIC0.69□□□□□ -2.3
ERCC1P07992 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
ERCC1P07992 Y_RNA.582-201ENST00000391023 95 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 U8.16-201ENST00000391279 133 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.68□□□□□ -2.3
ERCC1P07992 AC092447.3-201ENST00000426027 686 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.68□□□□□ -2.3
ERCC1P07992 MTCO2P7-201ENST00000446518 666 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
ERCC1P07992 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.68□□□□□ -2.3
ERCC1P07992 PCMTD1P1-201ENST00000455560 355 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.68□□□□□ -2.3
ERCC1P07992 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 RNA5SP255-201ENST00000516370 107 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 Y_RNA.717-201ENST00000517106 92 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.68□□□□□ -2.3
ERCC1P07992 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.68□□□□□ -2.3
ERCC1P07992 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.68□□□□□ -2.3
ERCC1P07992 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 AC106800.4-201ENST00000614905 153 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 AC097520.1-201ENST00000624435 385 ntBASIC0.68□□□□□ -2.3
ERCC1P07992 Y_RNA.184-201ENST00000363884 108 ntBASIC0.67□□□□□ -2.3
ERCC1P07992 RNU6-522P-201ENST00000364497 107 ntBASIC0.67□□□□□ -2.3
ERCC1P07992 MIR562-201ENST00000384894 95 ntBASIC0.67□□□□□ -2.3
ERCC1P07992 RNU6-159P-201ENST00000391080 106 ntBASIC0.67□□□□□ -2.3
ERCC1P07992 RNU6-648P-201ENST00000410190 107 ntBASIC0.67□□□□□ -2.3
ERCC1P07992 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.67□□□□□ -2.3
ERCC1P07992 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms