| MT1E | P04732 | AC008521.1-201 | ENST00000587471 | 187 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| MT1E | P04732 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| MT1E | P04732 | AL606834.3-201 | ENST00000602615 | 496 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| MT1E | P04732 | AC022217.4-201 | ENST00000604389 | 163 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| MT1E | P04732 | AC018889.1-201 | ENST00000605372 | 397 nt | BASIC | -1.13 | □□□□□ -2.59 | | |
| MT1E | P04732 | RNY4P7-201 | ENST00000364600 | 96 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | RNU6-975P-201 | ENST00000384296 | 105 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | MIR518B-201 | ENST00000385127 | 83 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | RNU6-817P-201 | ENST00000391083 | 104 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | SNORA81-201 | ENST00000408493 | 178 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | CDK8P2-201 | ENST00000415020 | 547 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | AL365258.1-201 | ENST00000440885 | 247 nt | TSL 3 BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | PLCB1-IT1-202 | ENST00000451443 | 251 nt | TSL 3 BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | snoU13.14-201 | ENST00000459372 | 104 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | AC079467.1-201 | ENST00000508512 | 503 nt | TSL 3 BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | HSPE1P23-201 | ENST00000509838 | 286 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | SNRPGP1-201 | ENST00000553864 | 222 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | AL122017.1-202 | ENST00000570612 | 319 nt | TSL 5 BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | POLR3GP2-201 | ENST00000588366 | 668 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | AP001330.5-201 | ENST00000607176 | 411 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | AL159972.1-201 | ENST00000625150 | 448 nt | BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | GLMN-201 | ENST00000370360 | 1995 nt | APPRIS P1 TSL 1 (best) BASIC | -1.14 | □□□□□ -2.59 | | |
| MT1E | P04732 | SNORD32B-201 | ENST00000364460 | 84 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | SNORD31B-201 | ENST00000364977 | 69 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | DEFB135-201 | ENST00000382208 | 234 nt | APPRIS P1 TSL 1 (best) BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | MIR526A1-201 | ENST00000384897 | 85 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | MIR1302-7-201 | ENST00000408841 | 72 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | RNU2-23P-201 | ENST00000410545 | 195 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | AF129075.1-201 | ENST00000457162 | 794 nt | TSL 3 BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | RNU6-479P-201 | ENST00000516348 | 105 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | MIR2115-201 | ENST00000516657 | 100 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | AC135803.1-201 | ENST00000608748 | 565 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | AP003400.6-201 | ENST00000624698 | 740 nt | BASIC | -1.15 | □□□□□ -2.59 | | |
| MT1E | P04732 | Y_RNA.430-201 | ENST00000384081 | 110 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU5A-6P-201 | ENST00000384136 | 116 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | MIR9-2-201 | ENST00000384838 | 87 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | MIR516B1-201 | ENST00000385211 | 90 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-1001P-201 | ENST00000411265 | 100 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | TMSB4XP6-201 | ENST00000415187 | 135 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | BTBD7P2-201 | ENST00000441962 | 620 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL606517.1-201 | ENST00000446914 | 387 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC016751.1-201 | ENST00000458254 | 306 nt | TSL 3 BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | snoU13.16-201 | ENST00000459350 | 104 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC113347.3-201 | ENST00000509113 | 148 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-287P-201 | ENST00000516230 | 98 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.715-201 | ENST00000517082 | 110 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC018861.2-201 | ENST00000518078 | 513 nt | TSL 2 BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC024995.1-201 | ENST00000523014 | 93 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC095057.3-201 | ENST00000567102 | 1157 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | BNIP3P24-201 | ENST00000593398 | 557 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL162424.1-201 | ENST00000602325 | 221 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL117336.2-201 | ENST00000602435 | 335 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL359999.1-201 | ENST00000604513 | 294 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC121247.2-201 | ENST00000604776 | 136 nt | BASIC | -1.16 | □□□□□ -2.6 | | |
| MT1E | P04732 | snoU2-30.2-201 | ENST00000362805 | 70 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORD18.1-201 | ENST00000363807 | 70 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.336-201 | ENST00000365307 | 109 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORA36A-201 | ENST00000384221 | 132 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-784P-201 | ENST00000384330 | 106 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | MIR520C-201 | ENST00000385005 | 87 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | MIR496-201 | ENST00000385226 | 102 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | TRAJ34-201 | ENST00000390503 | 58 nt | APPRIS P1 BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | MRPL42P3-201 | ENST00000401492 | 326 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC098592.1-201 | ENST00000419352 | 333 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC013262.1-201 | ENST00000426710 | 252 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | LINC02032-201 | ENST00000490465 | 391 nt | TSL 2 BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC079382.1-201 | ENST00000493346 | 557 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | LAMTOR3P2-201 | ENST00000504479 | 232 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC068587.4-201 | ENST00000533893 | 186 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC040936.1-201 | ENST00000534543 | 172 nt | TSL 5 BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC107023.1-201 | ENST00000552757 | 356 nt | TSL 5 BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC008536.2-201 | ENST00000607284 | 349 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC008250.2-201 | ENST00000615261 | 205 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL356094.1-201 | ENST00000624663 | 1212 nt | BASIC | -1.17 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.117-201 | ENST00000363294 | 101 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.125-201 | ENST00000363371 | 111 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORA22B-201 | ENST00000383876 | 138 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC114491.1-201 | ENST00000416095 | 246 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC106883.1-201 | ENST00000418805 | 562 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL354692.1-201 | ENST00000423044 | 315 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | DPRXP1-201 | ENST00000426312 | 460 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | GPM6BP2-201 | ENST00000432046 | 144 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AL138830.1-201 | ENST00000435802 | 402 nt | TSL 3 BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | GPM6BP1-201 | ENST00000446387 | 144 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORD54-201 | ENST00000459159 | 67 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-1332P-201 | ENST00000516666 | 104 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC005695.2-201 | ENST00000579641 | 259 nt | TSL 3 BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC112250.2-201 | ENST00000609450 | 491 nt | TSL 3 BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | AC006927.4-201 | ENST00000639187 | 543 nt | BASIC | -1.18 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.49-201 | ENST00000362714 | 112 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU5E-10P-201 | ENST00000363506 | 118 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | Y_RNA.190-201 | ENST00000363964 | 101 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORA24.1-201 | ENST00000384401 | 135 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | -1.19 | □□□□□ -2.6 | | |
| MT1E | P04732 | SNORD28-201 | ENST00000384706 | 75 nt | BASIC | -1.19 | □□□□□ -2.6 | | |