Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.18□□□□□ -2.38
HLA-DRAP01903 USP9YP29-201ENST00000445112 563 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 AL356010.1-201ENST00000456364 102 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 AP000870.1-201ENST00000472927 406 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 SNORA14.1-201ENST00000516113 141 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 AC087854.1-201ENST00000519706 414 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 RPL21P9-201ENST00000556149 474 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 MIR924-201ENST00000638017 53 ntBASIC0.18□□□□□ -2.38
HLA-DRAP01903 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
HLA-DRAP01903 AL049545.1-201ENST00000401856 572 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AL390237.1-201ENST00000404226 1415 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 RNU6-994P-201ENST00000410507 111 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AL593851.1-201ENST00000426171 157 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 MTND5P16-201ENST00000460269 1703 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 MTATP6P9-201ENST00000515039 680 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 RNU6-341P-201ENST00000516973 96 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AP002004.2-201ENST00000531656 154 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.17□□□□□ -2.38
HLA-DRAP01903 AC064836.2-201ENST00000609491 462 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AC122133.1-201ENST00000613964 233 ntBASIC0.17□□□□□ -2.38
HLA-DRAP01903 AC005592.1-201ENST00000566527 1640 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 RNU6-1214P-201ENST00000363650 109 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 SNORD115-8-201ENST00000363856 82 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 SNORD115-38-201ENST00000365037 82 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 RNU6-784P-201ENST00000384330 106 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 MIR140-201ENST00000385282 100 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 RNA5SP219-201ENST00000390940 113 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 MIR891A-201ENST00000401237 79 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 SNORD111-201ENST00000408139 94 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 RNU2-9P-201ENST00000410194 145 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 MTCO3P19-201ENST00000415864 321 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 MTND4P7-201ENST00000523876 130 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.16□□□□□ -2.38
HLA-DRAP01903 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DRAP01903 MIR8076-201ENST00000611401 83 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 AC016597.2-201ENST00000613256 341 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 AC068137.4-201ENST00000638485 296 ntBASIC0.16□□□□□ -2.38
HLA-DRAP01903 Y_RNA.36-201ENST00000362602 112 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 RNU6-833P-201ENST00000363486 107 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 SNORD87-201ENST00000364849 89 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 Y_RNA.336-201ENST00000365307 109 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 RNU6-282P-201ENST00000365357 103 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 MIR193B-201ENST00000384907 83 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 SNORD105-201ENST00000386910 85 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.15□□□□□ -2.39
HLA-DRAP01903 MRPS18CP6-201ENST00000423587 223 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 MTND4P32-201ENST00000437189 1237 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 SNORD65B-201ENST00000459126 73 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 RPL23AP75-201ENST00000491601 451 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC010469.2-201ENST00000496412 480 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC097462.1-201ENST00000514125 324 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 SNORA25.14-201ENST00000516481 132 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 RNU7-172P-201ENST00000517125 64 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AP001372.4-201ENST00000524889 472 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.15□□□□□ -2.39
HLA-DRAP01903 AP003716.2-201ENST00000528260 108 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC023157.2-201ENST00000540596 141 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 MIR5583-1-201ENST00000580941 59 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC008536.2-201ENST00000607284 349 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
HLA-DRAP01903 MIRLET7C-201ENST00000362160 84 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU6-181P-201ENST00000363225 107 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 Y_RNA.267-201ENST00000364679 109 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU6-1329P-201ENST00000365664 107 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 MIR526A1-201ENST00000384897 85 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.14□□□□□ -2.39
HLA-DRAP01903 MTND4LP16-201ENST00000440828 295 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.14□□□□□ -2.39
HLA-DRAP01903 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU7-180P-201ENST00000459240 63 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.14□□□□□ -2.39
HLA-DRAP01903 AC010598.1-201ENST00000510378 103 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 SNORA18.6-201ENST00000516792 115 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU6-445P-201ENST00000516949 107 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 AC104576.1-201ENST00000524225 88 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.14□□□□□ -2.39
HLA-DRAP01903 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 AL138726.1-201ENST00000614873 333 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 uc_338.34-201ENST00000617467 174 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 AC100810.6-201ENST00000638068 285 ntBASIC0.14□□□□□ -2.39
HLA-DRAP01903 RNU6-137P-201ENST00000363680 108 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 RNU5F-3P-201ENST00000363767 117 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 RNU4-28P-201ENST00000364739 141 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 MIR450B-201ENST00000401182 78 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 RNU6-177P-201ENST00000411257 104 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 SNORD11.1-201ENST00000459482 85 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 AF235103.2-201ENST00000525753 346 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 AC027288.2-201ENST00000553028 243 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 RNU6-94P-201ENST00000607728 107 ntBASIC0.13□□□□□ -2.39
HLA-DRAP01903 SNORA1B-201ENST00000362535 133 ntBASIC0.12□□□□□ -2.39
HLA-DRAP01903 RNU6-1120P-201ENST00000362988 108 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms