Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.47□□□□□ -2.33
UBFD1O14562 AL035398.1-201ENST00000430869 322 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 Z82188.1-201ENST00000436709 154 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 MTCO2P18-201ENST00000457151 658 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNU7-21P-201ENST00000459430 62 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNA5SP255-201ENST00000516370 107 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AC040904.1-201ENST00000590850 223 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AC087683.1-201ENST00000591187 441 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.47□□□□□ -2.33
UBFD1O14562 AC092747.3-201ENST00000603769 301 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 Z94722.1-201ENST00000604328 474 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 PRELID3BP2-201ENST00000605362 201 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AL357078.3-201ENST00000607528 618 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AC072046.2-201ENST00000618366 268 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
UBFD1O14562 RNU6-727P-201ENST00000363592 107 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.46□□□□□ -2.34
UBFD1O14562 RNU6-784P-201ENST00000384330 106 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 RNU6-348P-201ENST00000384386 107 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 RNA5SP127-201ENST00000411051 133 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.46□□□□□ -2.34
UBFD1O14562 MTCO2P19-201ENST00000427513 598 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.46□□□□□ -2.34
UBFD1O14562 AC091133.4-201ENST00000511142 308 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AC027419.1-201ENST00000522976 328 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AP002001.1-203ENST00000534002 267 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.46□□□□□ -2.34
UBFD1O14562 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.46□□□□□ -2.34
UBFD1O14562 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.46□□□□□ -2.34
UBFD1O14562 AC004223.2-201ENST00000590309 544 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 AC068790.6-201ENST00000602558 258 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 MIR8076-201ENST00000611401 83 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 ELL2P3-201ENST00000457883 1602 ntBASIC0.46□□□□□ -2.34
UBFD1O14562 MIR330-201ENST00000362196 94 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 SNORD50.1-201ENST00000362987 71 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 Y_RNA.258-201ENST00000364613 105 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 Y_RNA.415-201ENST00000384012 112 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 RNU6-38P-201ENST00000384085 107 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
UBFD1O14562 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.45□□□□□ -2.34
UBFD1O14562 AL606489.2-201ENST00000433886 234 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 MTCO2P16-201ENST00000436962 677 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 RPS27P22-201ENST00000478056 241 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 TRBVA-201ENST00000498804 316 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 MTCO2P4-201ENST00000517968 247 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 MIR4528-201ENST00000577763 90 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 SNORD11B-201ENST00000607707 90 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 AL096861.1-201ENST00000610899 123 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 AC091931.1-201ENST00000623488 728 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 AC005609.4-201ENST00000625071 447 ntBASIC0.45□□□□□ -2.34
UBFD1O14562 Y_RNA.167-201ENST00000363735 109 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 RNU4-20P-201ENST00000365601 151 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 RNU6-424P-201ENST00000384367 105 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AL451046.2-201ENST00000403074 277 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
UBFD1O14562 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 MRPS10P2-201ENST00000431226 381 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AL359672.1-201ENST00000442302 409 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 SNORD65B-201ENST00000459126 73 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 RN7SKP287-201ENST00000516546 266 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.44□□□□□ -2.34
UBFD1O14562 APOOP3-201ENST00000536787 586 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AC023157.2-201ENST00000540596 141 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.44□□□□□ -2.34
UBFD1O14562 AL162424.1-201ENST00000602325 221 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.44□□□□□ -2.34
UBFD1O14562 AL117336.2-201ENST00000602435 335 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AC093424.1-201ENST00000604999 338 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AL353765.1-201ENST00000605514 183 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 AC005592.1-201ENST00000566527 1640 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 MTND4P12-201ENST00000498999 1377 ntBASIC0.44□□□□□ -2.34
UBFD1O14562 SNORA2.2-201ENST00000365473 135 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
UBFD1O14562 MIR10B-201ENST00000385011 110 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 MIR320B2-201ENST00000408479 138 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 MIR1197-201ENST00000408818 88 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.43□□□□□ -2.34
UBFD1O14562 AC104332.1-201ENST00000440471 797 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.43□□□□□ -2.34
UBFD1O14562 MTND1P27-201ENST00000451117 902 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AL049830.1-201ENST00000468034 425 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 OR9P1P-201ENST00000496431 281 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AC022493.2-201ENST00000506122 481 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.43□□□□□ -2.34
UBFD1O14562 SNORA25.14-201ENST00000516481 132 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 RNU6-58P-201ENST00000517143 103 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.43□□□□□ -2.34
UBFD1O14562 MIR4438-201ENST00000585271 93 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AC017083.3-201ENST00000609955 700 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 AC104465.1-201ENST00000611365 139 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 FAM157A-202ENST00000615155 405 ntBASIC0.43□□□□□ -2.34
UBFD1O14562 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 271.8 ms