Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SEPT14P17-201ENST00000617978 177 ntBASIC0.22□□□□□ -2.37
SDCBPO00560 Y_RNA.226-201ENST00000364337 114 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 RNU6-42P-201ENST00000384165 107 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
SDCBPO00560 RNU6-584P-201ENST00000410350 95 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MTATP6P18-201ENST00000417994 673 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MRPS18CP6-201ENST00000423587 223 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MTCYBP10-201ENST00000424905 650 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AL358934.1-201ENST00000432346 324 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MTND4P32-201ENST00000437189 1237 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.21□□□□□ -2.38
SDCBPO00560 NDUFB4P10-201ENST00000452541 359 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MTND2P39-201ENST00000457230 764 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC010469.2-201ENST00000496412 480 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC107401.1-201ENST00000503426 685 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.21□□□□□ -2.38
SDCBPO00560 AC092436.3-201ENST00000511788 257 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC097462.1-201ENST00000514125 324 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 SNORA25.14-201ENST00000516481 132 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.21□□□□□ -2.38
SDCBPO00560 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.21□□□□□ -2.38
SDCBPO00560 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.21□□□□□ -2.38
SDCBPO00560 AL157687.1-201ENST00000554853 619 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MTND1P15-201ENST00000579262 949 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC025627.3-201ENST00000582078 182 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MIR5692C1-201ENST00000585309 91 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 Z83818.1-201ENST00000603584 150 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AL121757.2-201ENST00000611223 313 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 AC007014.2-201ENST00000615581 479 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
SDCBPO00560 MIR103A2-201ENST00000362154 78 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 SNORD50.1-201ENST00000362987 71 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-1120P-201ENST00000362988 108 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-873P-201ENST00000363833 107 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 SNORD115-8-201ENST00000363856 82 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 Y_RNA.267-201ENST00000364679 109 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 SNORD115-38-201ENST00000365037 82 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 Y_RNA.381-201ENST00000365666 102 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-245P-201ENST00000384020 107 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-1297P-201ENST00000384415 104 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNY1P14-201ENST00000384426 108 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MIR521-1-201ENST00000384902 87 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MIR320B2-201ENST00000408479 138 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNA5SP193-201ENST00000410353 107 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNA5SP222-201ENST00000411039 105 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.2□□□□□ -2.38
SDCBPO00560 Z98949.2-201ENST00000440996 144 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MTCO2P18-201ENST00000457151 658 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AC091179.3-201ENST00000474761 144 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-189P-201ENST00000516120 101 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-1110P-201ENST00000516462 101 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 RNU6-232P-201ENST00000517144 64 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MTND4P7-201ENST00000523876 130 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AC017083.3-201ENST00000609955 700 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MIR8076-201ENST00000611401 83 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AL158209.2-201ENST00000619266 216 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AF246928.1-201ENST00000623768 87 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 AC079248.2-201ENST00000623779 326 ntBASIC0.2□□□□□ -2.38
SDCBPO00560 MIRLET7D-201ENST00000362263 87 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 RNU6-1266P-201ENST00000362794 105 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 Y_RNA.238-201ENST00000364441 102 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 Y_RNA.336-201ENST00000365307 109 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 RNU6-996P-201ENST00000365438 107 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SDCBPO00560 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 MTND2P18-201ENST00000419962 1030 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 MTCO1P19-201ENST00000443487 500 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 MTND4P18-201ENST00000447010 465 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC079354.2-201ENST00000453523 154 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 TPTE2P5-203ENST00000458118 728 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 MTCO3P38-201ENST00000468910 766 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.19□□□□□ -2.38
SDCBPO00560 RNU7-41P-201ENST00000515917 61 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 RN7SKP164-201ENST00000516138 266 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 RN7SKP12-201ENST00000516275 143 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC087854.1-201ENST00000519706 414 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.19□□□□□ -2.38
SDCBPO00560 AP001372.4-201ENST00000524889 472 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC036111.3-201ENST00000526389 112 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC009094.1-201ENST00000564443 426 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC245884.10-201ENST00000597355 337 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.19□□□□□ -2.38
SDCBPO00560 AL136370.1-201ENST00000608166 691 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC007684.1-201ENST00000609671 477 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC016597.2-201ENST00000613256 341 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AC103705.1-201ENST00000619013 241 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 AL390237.1-201ENST00000404226 1415 ntBASIC0.19□□□□□ -2.38
SDCBPO00560 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SDCBPO00560 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
SDCBPO00560 FGF7P2-201ENST00000332473 296 ntBASIC0.18□□□□□ -2.38
SDCBPO00560 Y_RNA.378-201ENST00000365652 113 ntBASIC0.18□□□□□ -2.38
SDCBPO00560 RNY3P9-201ENST00000384727 106 ntBASIC0.18□□□□□ -2.38
SDCBPO00560 MIR32-201ENST00000384965 70 ntBASIC0.18□□□□□ -2.38
SDCBPO00560 RNU1-139P-201ENST00000391307 165 ntBASIC0.18□□□□□ -2.38
SDCBPO00560 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.18□□□□□ -2.38
SDCBPO00560 RNU7-63P-201ENST00000459054 62 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms