Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNU7-128P-201ENST00000517247 62 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 AK6P2-201ENST00000549020 471 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.3□□□□□ -2.2
DDX39AO00148 MIR4273-201ENST00000582824 84 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 AL390123.1-201ENST00000603216 237 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.3□□□□□ -2.2
DDX39AO00148 AC068137.4-201ENST00000638485 296 ntBASIC1.3□□□□□ -2.2
DDX39AO00148 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
DDX39AO00148 Y_RNA.184-201ENST00000363884 108 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 RNU6-440P-201ENST00000390882 105 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AL356776.1-201ENST00000406574 447 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AL034345.1-201ENST00000407768 123 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 RNA5SP247-201ENST00000411181 105 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 RPL37P10-201ENST00000412884 288 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AC009161.1-201ENST00000417306 376 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 MTATP6P26-201ENST00000445926 662 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 MTCO2P7-201ENST00000446518 666 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.29□□□□□ -2.2
DDX39AO00148 RPL39P38-201ENST00000467018 153 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AP000870.1-201ENST00000472927 406 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 FRG2DP-202ENST00000566967 323 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 MIR3942-201ENST00000585264 109 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AC015540.1-201ENST00000615828 501 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 AC090617.10-201ENST00000624308 134 ntBASIC1.29□□□□□ -2.2
DDX39AO00148 Y_RNA.9-201ENST00000362354 101 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 Y_RNA.533-201ENST00000384596 114 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.28□□□□□ -2.2
DDX39AO00148 USMG5P1-201ENST00000425964 177 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 DLGAP5P1-201ENST00000430307 464 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 MTND4P18-201ENST00000447010 465 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.28□□□□□ -2.2
DDX39AO00148 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 RNA5SP102-201ENST00000516865 106 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 RNU6-273P-201ENST00000516937 96 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 AL590705.4-201ENST00000532209 134 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 MIR5695-201ENST00000579717 85 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 AC010999.1-201ENST00000611856 324 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 AL133216.2-202ENST00000634512 349 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 ZNF299P-201ENST00000406845 1804 ntBASIC1.28□□□□□ -2.2
DDX39AO00148 MIR10B-201ENST00000385011 110 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.27□□□□□ -2.21
DDX39AO00148 TOMM22P2-201ENST00000430735 237 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.27□□□□□ -2.21
DDX39AO00148 MIR4438-201ENST00000585271 93 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AL162424.1-201ENST00000602325 221 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AC080013.6-201ENST00000606185 215 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AL021879.1-201ENST00000611756 288 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 AL513423.1-201ENST00000621695 132 ntBASIC1.27□□□□□ -2.21
DDX39AO00148 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 SNORA25.9-201ENST00000365087 128 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 RNU6-596P-201ENST00000365395 98 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 Y_RNA.490-201ENST00000384413 102 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 AC016907.1-201ENST00000419483 435 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
DDX39AO00148 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.26□□□□□ -2.21
DDX39AO00148 MRPS10P1-201ENST00000448483 130 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 RNU6-864P-201ENST00000516256 108 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 RNU6-1314P-201ENST00000517139 104 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 AC073349.3-201ENST00000617616 186 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 AC006435.5-201ENST00000624486 112 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 SNORD3E-202ENST00000627253 216 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 AC068647.2-201ENST00000637380 353 ntBASIC1.26□□□□□ -2.21
DDX39AO00148 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 RNU6-1013P-201ENST00000384180 107 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 MIR1276-201ENST00000408707 83 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 MTND4LP16-201ENST00000440828 295 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 RPS27P22-201ENST00000478056 241 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 Y_RNA.683-201ENST00000516508 93 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 RNU6-107P-201ENST00000516643 102 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 RNU1-54P-201ENST00000517181 120 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
DDX39AO00148 RNY4P14-201ENST00000363656 96 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.405-201ENST00000383979 100 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.436-201ENST00000384097 102 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.451-201ENST00000384200 100 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.524-201ENST00000384564 100 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.561-201ENST00000384694 100 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 RNU11-5P-201ENST00000391216 129 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
DDX39AO00148 SNORD65B-201ENST00000459126 73 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC092991.1-201ENST00000477176 376 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC087343.1-201ENST00000477341 475 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 RNU6-1114P-201ENST00000516022 107 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 Y_RNA.706-201ENST00000516933 99 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC091144.1-201ENST00000519573 138 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC027419.1-201ENST00000522976 328 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.24□□□□□ -2.21
DDX39AO00148 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.24□□□□□ -2.21
DDX39AO00148 AC012557.2-201ENST00000605919 418 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 AC018630.2-201ENST00000534866 2403 ntBASIC1.24□□□□□ -2.21
DDX39AO00148 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
DDX39AO00148 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.23□□□□□ -2.21
DDX39AO00148 RNU6-595P-201ENST00000363944 107 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 SNORA70.7-201ENST00000384159 133 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 RNU6-505P-201ENST00000384427 107 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 MIR660-201ENST00000385235 97 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 RNA5SP118-201ENST00000410385 109 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 USP9YP16-201ENST00000430287 407 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 MTND3P23-201ENST00000431980 347 ntBASIC1.23□□□□□ -2.21
DDX39AO00148 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms