Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC069271.1-201ENST00000445577 156 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC005042.3-201ENST00000453230 174 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 RPS29P27-201ENST00000463711 170 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC114811.1-201ENST00000507207 168 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC097462.1-201ENST00000514125 324 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 RNU4-49P-201ENST00000516080 140 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 RNU7-43P-201ENST00000516554 64 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 MIR4676-201ENST00000583078 72 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC120024.3-201ENST00000603167 156 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC080013.3-201ENST00000606839 578 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 AC104260.1-201ENST00000616660 539 ntBASIC-0.47□□□□□ -2.48
TCRBV3S1A0A5B6 SNORD45.3-201ENST00000363836 72 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 SNORD87-201ENST00000364849 89 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MIR562-201ENST00000384894 95 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MIR487A-201ENST00000385009 80 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 RNU4-46P-201ENST00000410818 138 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MTCO3P19-201ENST00000415864 321 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC098592.1-201ENST00000419352 333 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC104692.1-201ENST00000472406 90 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MIR2115-201ENST00000516657 100 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-63P-201ENST00000516690 95 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MTND1P5-201ENST00000517906 940 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 MRPS36P4-201ENST00000534436 298 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 HIF1AP1-201ENST00000553642 175 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AP001542.1-201ENST00000591314 200 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 BNIP3P40-201ENST00000596017 556 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC005176.2-201ENST00000596933 147 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 AC138749.5-201ENST00000611461 208 ntBASIC-0.48□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-925P-201ENST00000384629 104 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 ELOCP4-201ENST00000420090 333 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AL358176.2-201ENST00000425769 204 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AL606489.2-201ENST00000433886 234 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AF186996.7-201ENST00000492781 209 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 RPL39P5-202ENST00000512505 151 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 SCARNA8-201ENST00000515924 131 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 SNORA18.7-201ENST00000516910 131 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 RNU7-172P-201ENST00000517125 64 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AC022616.3-201ENST00000523940 148 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 MIR4771-2-201ENST00000577758 74 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AC090897.1-201ENST00000580909 226 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 MIR4771-1-201ENST00000582617 74 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 BNIP3P39-201ENST00000601077 554 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AL357075.2-201ENST00000614906 189 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AC104010.1-201ENST00000616889 150 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 AC006435.5-201ENST00000624486 112 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 MIR4251-201ENST00000635819 61 ntBASIC-0.49□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 MIR518E-201ENST00000385252 88 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 MIR454-201ENST00000390180 115 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RNU7-165P-201ENST00000458864 60 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RPL17P19-201ENST00000489069 552 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AC112204.1-201ENST00000502591 103 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RNU2-69P-201ENST00000516061 100 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AC105185.1-201ENST00000518705 535 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AGGF1P4-201ENST00000568249 801 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 MTND1P8-201ENST00000571424 950 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AL355375.2-201ENST00000574825 175 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AC011712.1-201ENST00000588959 234 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 AC008608.1-201ENST00000603910 127 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 SNORD11B-201ENST00000607707 90 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 RMST_3.1-201ENST00000611651 109 ntBASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.5□□□□□ -2.49
TCRBV3S1A0A5B6 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-266P-201ENST00000364225 107 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 AC117470.1-201ENST00000381974 330 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MIR136-201ENST00000385207 82 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MIR1197-201ENST00000408818 88 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MTND5P17-201ENST00000418405 1603 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MTND4P4-201ENST00000439033 1366 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MTCO2P3-201ENST00000442543 421 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 SUMO1P2-201ENST00000452524 304 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-612P-201ENST00000516909 102 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 MTND2P38-201ENST00000522536 667 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 RPL21P9-201ENST00000556149 474 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 AC092447.9-201ENST00000603395 144 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 AC009159.2-201ENST00000617603 606 ntBASIC-0.51□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-227P-201ENST00000362865 103 ntBASIC-0.52□□□□□ -2.49
TCRBV3S1A0A5B6 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms