Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.287-201ENST00000364853 94 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 MIR592-201ENST00000384959 97 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-763P-201ENST00000390865 106 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 SRIP3-201ENST00000413200 219 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AL135790.2-201ENST00000437701 267 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 RNU7-120P-201ENST00000459334 63 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 RN7SL504P-201ENST00000494496 287 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA4.4-201ENST00000515921 135 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-991P-201ENST00000516168 107 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AC087441.2-201ENST00000529141 262 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 MIR3944-201ENST00000581277 108 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AC096577.2-201ENST00000611455 153 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 AL365265.1-201ENST00000621045 234 ntBASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHA9Q9Y5H5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA48.5-201ENST00000391143 135 ntBASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 RN7SKP282-201ENST00000516824 299 ntBASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 MIR5692C2-201ENST00000577959 77 ntBASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PCDHA9Q9Y5H5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-1020P-201ENST00000363684 107 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA38.1-201ENST00000364172 131 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA72.4-201ENST00000384174 132 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AL031121.1-201ENST00000406553 254 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 OOSP1P1-201ENST00000423265 274 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC010154.1-201ENST00000425857 269 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 CR769767.1-201ENST00000436337 346 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC009238.1-201ENST00000442165 424 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC104389.3-201ENST00000445629 235 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC009237.6-201ENST00000446969 424 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 RPS26P55-201ENST00000471178 356 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 RNA5SP76-201ENST00000516277 87 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-856P-201ENST00000516959 98 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AP002392.1-201ENST00000537692 208 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 YPEL5P2-201ENST00000605553 359 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
PCDHA9Q9Y5H5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 MIR340-201ENST00000362125 95 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-653P-201ENST00000363074 106 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.124-201ENST00000363339 93 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-899P-201ENST00000363947 107 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA26.5-201ENST00000391215 123 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AC016909.1-201ENST00000415916 166 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AC025750.2-201ENST00000442609 450 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 BX510359.1-201ENST00000456973 237 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 U8.19-201ENST00000459095 133 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 RPL36AP21-201ENST00000490372 323 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 RNA5SP20-201ENST00000515976 84 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AC072026.1-201ENST00000605023 201 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 AC013791.1-201ENST00000616619 62 ntBASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCDHA9Q9Y5H5 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.180-201ENST00000363867 113 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.270-201ENST00000364693 104 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 RNU4-70P-201ENST00000384579 139 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 MIR887-201ENST00000401258 79 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 AL590004.2-201ENST00000404787 371 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-1337P-201ENST00000516525 95 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA31.26-201ENST00000517250 137 ntBASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHA9Q9Y5H5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms