Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC016909.1-201ENST00000415916 166 ntBASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 AL163195.1-201ENST00000496941 348 ntBASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 RNU1-142P-201ENST00000516682 145 ntBASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 AC024995.1-201ENST00000523014 93 ntBASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
HMG20BQ9P0W2 AC091812.1-201ENST00000432235 1948 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 RNU6-280P-201ENST00000364145 104 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 Y_RNA.573-201ENST00000384763 105 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 RNA5SP109-201ENST00000391010 116 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 RNA5SP504-201ENST00000410676 117 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 MTND4LP16-201ENST00000440828 295 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 RPL30P10-201ENST00000488148 337 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 Y_RNA.673-201ENST00000516306 88 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 RNA5SP454-201ENST00000517231 127 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 AC027288.2-201ENST00000553028 243 ntBASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.43□□□□□ -2.18
HMG20BQ9P0W2 Y_RNA.89-201ENST00000363031 102 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RNU6-137P-201ENST00000363680 108 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 SNORA25.9-201ENST00000365087 128 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RNU6-1013P-201ENST00000384180 107 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 Y_RNA.450-201ENST00000384198 113 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RPS27P16-201ENST00000425758 201 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RNU7-175P-201ENST00000515915 61 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RNA5SP102-201ENST00000516865 106 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 RNU6-1314P-201ENST00000517139 104 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 UBL5P4-201ENST00000562584 236 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 AC015688.6-201ENST00000577737 104 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 AC093913.1-201ENST00000614178 329 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 AC009248.2-201ENST00000619826 254 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 MTND4P12-201ENST00000498999 1377 ntBASIC1.42□□□□□ -2.18
HMG20BQ9P0W2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 U3.8-201ENST00000363675 217 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-534P-201ENST00000364877 106 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 Y_RNA.295-201ENST00000364918 102 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-17P-201ENST00000384245 107 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-18P-201ENST00000384527 107 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 MIR499A-201ENST00000384903 122 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RPL21P1-201ENST00000399532 476 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 AL078604.3-201ENST00000615580 211 ntBASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HMG20BQ9P0W2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU5F-3P-201ENST00000363767 117 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU6-793P-201ENST00000384233 104 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.533-201ENST00000384596 114 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 MIR194-1-201ENST00000384892 85 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU6-159P-201ENST00000391080 106 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU6-864P-201ENST00000516256 108 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU6-720P-201ENST00000516363 108 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 RNU1-54P-201ENST00000517181 120 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AC134698.4-201ENST00000523451 826 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AL442163.3-201ENST00000554110 156 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 TPRKBP2-201ENST00000565969 475 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AC005668.1-201ENST00000571142 476 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 MIR5696-201ENST00000578474 85 ntBASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.4□□□□□ -2.19
HMG20BQ9P0W2 MIR96-201ENST00000362288 78 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.3-201ENST00000362331 103 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.318-201ENST00000365131 97 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 RNA5SP259-201ENST00000365541 109 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 MIR1185-2-201ENST00000408687 86 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AL591704.2-201ENST00000421658 181 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 SNX2P2-201ENST00000424553 323 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AC010154.1-201ENST00000425857 269 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AL589823.1-201ENST00000429577 183 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 COX6CP14-201ENST00000469580 174 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AC091179.3-201ENST00000474761 144 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AL590705.4-201ENST00000532209 134 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 EIF1P4-201ENST00000572664 335 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AL929325.1-201ENST00000603096 117 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AC040896.1-201ENST00000613819 479 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 AL133216.2-202ENST00000634512 349 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 MIR3662-201ENST00000637030 95 ntBASIC1.39□□□□□ -2.19
HMG20BQ9P0W2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HMG20BQ9P0W2 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.405-201ENST00000383979 100 ntBASIC1.38□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.451-201ENST00000384200 100 ntBASIC1.38□□□□□ -2.19
HMG20BQ9P0W2 Y_RNA.453-201ENST00000384223 109 ntBASIC1.38□□□□□ -2.19
HMG20BQ9P0W2 RNU6-831P-201ENST00000384548 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms