Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC079354.2-201ENST00000453523 154 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 TPT1P7-201ENST00000458300 517 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 MTCO1P29-201ENST00000496868 288 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 RNA5SP401-201ENST00000515920 127 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AL137100.2-201ENST00000555786 315 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AC022432.1-201ENST00000595739 310 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AC007684.1-201ENST00000609671 477 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 AC017083.3-201ENST00000609955 700 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.1-201ENST00000352915 104 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-199P-201ENST00000362954 107 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 SNORD115-8-201ENST00000363856 82 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 SNORD115-38-201ENST00000365037 82 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-245P-201ENST00000384020 107 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AL445305.1-201ENST00000432577 575 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.654-201ENST00000497848 106 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-947P-201ENST00000516264 106 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-1332P-201ENST00000516666 104 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AC016957.1-201ENST00000534895 309 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AC087752.4-201ENST00000605911 462 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 AC027514.1-201ENST00000588561 1603 ntBASIC0.63□□□□□ -2.31
SDHAF3Q9NRP4 MTND4P12-201ENST00000498999 1377 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.100-201ENST00000363141 102 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 Y_RNA.415-201ENST00000384012 112 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 MIR1287-201ENST00000408492 90 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 MTCO1P20-201ENST00000425366 358 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 CALM2P4-201ENST00000430810 426 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-1208P-201ENST00000459588 107 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC091133.4-201ENST00000511142 308 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 RNA5SP54-201ENST00000516951 92 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-58P-201ENST00000517143 103 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC090049.2-201ENST00000550377 109 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AC100830.2-201ENST00000581636 240 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 MIR151B-201ENST00000584249 96 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 AL133215.3-201ENST00000609801 448 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.62□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-727P-201ENST00000363592 107 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 U3.8-201ENST00000363675 217 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 SNORD113-7-201ENST00000363762 77 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-214P-201ENST00000384130 107 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 MIR32-201ENST00000384965 70 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AC093850.1-201ENST00000454121 251 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 SNORA25.14-201ENST00000516481 132 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 LRRC34P1-201ENST00000542742 915 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 MIR4760-201ENST00000585040 80 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AL162424.1-201ENST00000602325 221 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AC073648.5-201ENST00000603502 305 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AC073114.1-201ENST00000612027 490 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 AL391262.2-201ENST00000622466 494 ntBASIC0.61□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-137P-201ENST00000363680 108 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-873P-201ENST00000363833 107 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-424P-201ENST00000384367 105 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-933P-201ENST00000384424 107 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 U8.16-201ENST00000391279 133 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 AL590002.1-201ENST00000406554 418 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 RNU7-187P-201ENST00000458985 68 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 AC027288.2-201ENST00000553028 243 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 AL158209.2-201ENST00000619266 216 ntBASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-110P-201ENST00000384508 104 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 MIR514A2-201ENST00000385131 88 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 MIR514A3-201ENST00000385132 88 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 EIF4E2P1-201ENST00000393781 255 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 MIR942-201ENST00000401111 86 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 AL451046.2-201ENST00000403074 277 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 MTCO3P18-201ENST00000440206 761 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 MTND3P16-201ENST00000452205 344 ntBASIC0.59□□□□□ -2.31
SDHAF3Q9NRP4 RNU6-261P-201ENST00000459506 102 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 229.8 ms