Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.39□□□□□ -2.19
NXF3Q9H4D5 RNU6-344P-201ENST00000516635 111 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 AC134698.4-201ENST00000523451 826 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 AC005899.2-201ENST00000584353 90 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 AC005014.2-201ENST00000607795 599 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 AL590240.4-201ENST00000616908 390 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.39□□□□□ -2.19
NXF3Q9H4D5 MIR424-201ENST00000362227 98 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.132-201ENST00000363421 102 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.474-201ENST00000384341 102 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 MIR586-201ENST00000385035 97 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 RNU6-159P-201ENST00000391080 106 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 SNORA75.4-201ENST00000391278 119 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
NXF3Q9H4D5 MIR1283-1-201ENST00000408494 87 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC139712.2-201ENST00000424302 339 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NXF3Q9H4D5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 MTND4P18-201ENST00000447010 465 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC010531.2-201ENST00000465012 153 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 RPL7P42-201ENST00000481005 679 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC067942.3-201ENST00000512025 362 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AL117351.2-201ENST00000513571 157 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC105029.1-201ENST00000520250 669 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 RRN3P3-201ENST00000549207 578 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AL121579.1-201ENST00000555129 305 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AP001094.1-201ENST00000579805 193 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC005730.3-201ENST00000583067 366 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AC100812.1-201ENST00000607622 580 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 PISRT1.1-201ENST00000616930 107 ntBASIC1.38□□□□□ -2.19
NXF3Q9H4D5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
NXF3Q9H4D5 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNU1-62P-201ENST00000362599 164 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.142-201ENST00000363491 102 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNU5F-3P-201ENST00000363767 117 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNU6-541P-201ENST00000384709 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNA5SP100-201ENST00000410903 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNA5SP59-201ENST00000410922 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.37□□□□□ -2.19
NXF3Q9H4D5 MTCO3P29-201ENST00000432119 779 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 HMGN2P9-201ENST00000476875 229 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNU6-307P-201ENST00000516743 106 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNU6-1213P-201ENST00000517075 94 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.37□□□□□ -2.19
NXF3Q9H4D5 MIR4753-201ENST00000585119 83 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AC113139.1-201ENST00000605049 239 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AL355802.3-201ENST00000607571 545 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.37□□□□□ -2.19
NXF3Q9H4D5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AC025253.1-201ENST00000613623 543 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AC091895.1-201ENST00000624494 256 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 AC008873.1-201ENST00000625051 138 ntBASIC1.37□□□□□ -2.19
NXF3Q9H4D5 RNY1P16-201ENST00000363063 111 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU6-331P-201ENST00000384724 107 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 MIR10B-201ENST00000385011 110 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU6-700P-201ENST00000391043 107 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 MTCYBP10-201ENST00000424905 650 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 MTND3P23-201ENST00000431980 347 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.36□□□□□ -2.19
NXF3Q9H4D5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AP000870.1-201ENST00000472927 406 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 HMGN1P7-201ENST00000491722 313 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AC091951.2-201ENST00000500762 203 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AC025465.3-201ENST00000510570 311 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU6-948P-201ENST00000516374 107 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 SNORA25.14-201ENST00000516481 132 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU2-34P-201ENST00000516534 121 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.706-201ENST00000516933 99 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.36□□□□□ -2.19
NXF3Q9H4D5 MIR548S-201ENST00000581352 82 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 AL669831.3-213ENST00000636676 183 ntBASIC1.36□□□□□ -2.19
NXF3Q9H4D5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-1188P-201ENST00000363795 107 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-873P-201ENST00000363833 107 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-280P-201ENST00000364145 104 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-418P-201ENST00000384035 107 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-975P-201ENST00000384296 105 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU1-139P-201ENST00000391307 165 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 MIR190B-201ENST00000401119 79 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 RNU6-370P-201ENST00000411008 104 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.35□□□□□ -2.19
NXF3Q9H4D5 MTND5P20-201ENST00000448677 143 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
NXF3Q9H4D5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms