Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU6-793P-201ENST00000384233 104 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 MIR1185-2-201ENST00000408687 86 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 AC009161.1-201ENST00000417306 376 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS35Q96QK1 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS35Q96QK1 AC134698.4-201ENST00000523451 826 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 EIF1P4-201ENST00000572664 335 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 AL365434.2-201ENST00000607979 234 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 AC100810.6-201ENST00000638068 285 ntBASIC1.26□□□□□ -2.21
VPS35Q96QK1 AL391987.6-201ENST00000305671 199 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 RNU6-623P-201ENST00000363143 105 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS35Q96QK1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 FGF7P8-201ENST00000402994 292 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 AC005002.2-201ENST00000438228 269 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS35Q96QK1 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 AL163540.1-201ENST00000485382 386 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 AC022432.1-201ENST00000595739 310 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 AC021506.2-201ENST00000612354 169 ntBASIC1.25□□□□□ -2.21
VPS35Q96QK1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 RNU4-12P-201ENST00000365233 139 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 SNX2P2-201ENST00000424553 323 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 AC010154.1-201ENST00000425857 269 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 AP000870.1-201ENST00000472927 406 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 RNU7-175P-201ENST00000515915 61 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 RNU6-720P-201ENST00000516363 108 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 AL137100.2-201ENST00000555786 315 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 MIR4273-201ENST00000582824 84 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 AC022217.4-201ENST00000604389 163 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS35Q96QK1 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS35Q96QK1 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
VPS35Q96QK1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS35Q96QK1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS35Q96QK1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNU6-596P-201ENST00000365395 98 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNA5SP259-201ENST00000365541 109 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNU6-831P-201ENST00000384548 107 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 Y_RNA.573-201ENST00000384763 105 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 MIR10B-201ENST00000385011 110 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNA5SP118-201ENST00000410385 109 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AC092473.1-201ENST00000441098 221 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS35Q96QK1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS35Q96QK1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AC093303.1-201ENST00000514549 295 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 SNORA31.10-201ENST00000516482 106 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNU6-1088P-201ENST00000516850 104 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 RNU7-128P-201ENST00000517247 62 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AL590705.4-201ENST00000532209 134 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 CYP3A52P-201ENST00000563326 91 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS35Q96QK1 FRG2DP-202ENST00000566967 323 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 ZNF299P-201ENST00000406845 1804 ntBASIC1.23□□□□□ -2.21
VPS35Q96QK1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS35Q96QK1 Y_RNA.3-201ENST00000362331 103 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 AC245047.3-201ENST00000429428 127 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 AL589823.1-201ENST00000429577 183 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 MTND4LP16-201ENST00000440828 295 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 MTND1P17-201ENST00000448961 204 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS35Q96QK1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS35Q96QK1 RNU1-54P-201ENST00000517181 120 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS35Q96QK1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS35Q96QK1 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 MIR5695-201ENST00000579717 85 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 AC016727.1-205ENST00000605437 569 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 AL359821.1-201ENST00000605519 182 ntBASIC1.22□□□□□ -2.21
VPS35Q96QK1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS35Q96QK1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS35Q96QK1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 RNU6-595P-201ENST00000363944 107 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS35Q96QK1 MTND4P18-201ENST00000447010 465 ntBASIC1.21□□□□□ -2.22
VPS35Q96QK1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS35Q96QK1 RAB11AP2-201ENST00000545905 639 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms