Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 Y_RNA.86-201ENST00000363020 111 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU5B-2P-201ENST00000363036 113 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-1317P-201ENST00000364582 104 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-214P-201ENST00000384130 107 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 SNORA29-201ENST00000384183 140 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNA5SP494-201ENST00000410653 129 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-325P-201ENST00000411132 105 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AL590632.1-201ENST00000424289 371 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
COL21A1Q96P44 MTATP6P13-201ENST00000438531 667 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.1□□□□□ -2.23
COL21A1Q96P44 snoU13.30-201ENST00000458951 104 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU7-187P-201ENST00000458985 68 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AC007215.1-201ENST00000464893 276 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-1041P-201ENST00000516254 102 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-358P-201ENST00000516564 75 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-256P-201ENST00000516747 97 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 RNU6-1223P-201ENST00000517124 104 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AF235103.2-201ENST00000525753 346 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AC100830.2-201ENST00000581636 240 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AC011712.1-201ENST00000588959 234 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AC060780.3-201ENST00000589464 80 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 AL138726.1-201ENST00000614873 333 ntBASIC1.1□□□□□ -2.23
COL21A1Q96P44 MIR96-201ENST00000362288 78 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-545P-201ENST00000362681 104 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 Y_RNA.135-201ENST00000363439 95 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 Y_RNA.212-201ENST00000364177 102 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-128P-201ENST00000383976 107 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-975P-201ENST00000384296 105 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-95P-201ENST00000384697 107 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MIR586-201ENST00000385035 97 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 AC060773.1-201ENST00000421698 310 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MTND3P9-201ENST00000429526 346 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MTND1P2-201ENST00000430604 821 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 OR2AQ1P-201ENST00000451972 200 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MTND1P11-201ENST00000456661 876 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RPS29P1-201ENST00000465274 159 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 HMGN2P9-201ENST00000476875 229 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 TRBVA-201ENST00000498804 316 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU4-49P-201ENST00000516080 140 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-864P-201ENST00000516256 108 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-1088P-201ENST00000516850 104 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 RNU6-273P-201ENST00000516937 96 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 AC026371.1-201ENST00000551867 419 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.09□□□□□ -2.23
COL21A1Q96P44 AC015688.6-201ENST00000577737 104 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MIR3937-201ENST00000580135 106 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 AC018638.8-201ENST00000588755 281 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.09□□□□□ -2.23
COL21A1Q96P44 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.09□□□□□ -2.23
COL21A1Q96P44 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.09□□□□□ -2.23
COL21A1Q96P44 MIR338-201ENST00000636369 67 ntBASIC1.09□□□□□ -2.23
COL21A1Q96P44 Y_RNA.30-201ENST00000362572 97 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 snoU2-30.2-201ENST00000362805 70 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 Y_RNA.151-201ENST00000363566 112 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 RNU6-418P-201ENST00000384035 107 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 RNU6-968P-201ENST00000384076 107 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 MIR625-201ENST00000385047 85 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC009161.1-201ENST00000417306 376 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 RPS27P16-201ENST00000425758 201 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.08□□□□□ -2.24
COL21A1Q96P44 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.08□□□□□ -2.24
COL21A1Q96P44 MTCO2P30-201ENST00000503662 364 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC018710.1-201ENST00000506509 158 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.08□□□□□ -2.24
COL21A1Q96P44 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.08□□□□□ -2.24
COL21A1Q96P44 CPDP1-201ENST00000579660 283 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC009248.2-201ENST00000619826 254 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 AL133216.2-202ENST00000634512 349 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 CASC19-280ENST00000642102 1351 ntBASIC1.08□□□□□ -2.24
COL21A1Q96P44 Y_RNA.301-201ENST00000364990 103 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 RNU6-1283P-201ENST00000365314 105 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 SNORD116-11-201ENST00000383882 92 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 RBMX2P4-201ENST00000441256 376 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AC004386.2-201ENST00000441858 148 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.07□□□□□ -2.24
COL21A1Q96P44 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.07□□□□□ -2.24
COL21A1Q96P44 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.07□□□□□ -2.24
COL21A1Q96P44 MTCO1P29-201ENST00000496868 288 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AC093852.1-201ENST00000503587 266 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 DEFB131C-201ENST00000528817 165 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.07□□□□□ -2.24
COL21A1Q96P44 MIR4709-201ENST00000577272 72 ntBASIC1.07□□□□□ -2.24
COL21A1Q96P44 AL133215.3-201ENST00000609801 448 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms