Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
ZNF560Q96MR9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.42□□□□□ -2.18
ZNF560Q96MR9 ZNF299P-201ENST00000406845 1804 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNU6-595P-201ENST00000363944 107 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 Y_RNA.453-201ENST00000384223 109 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNU6-793P-201ENST00000384233 104 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 Y_RNA.516-201ENST00000384541 124 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNU6-306P-201ENST00000384617 107 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNU6-1148P-201ENST00000410992 104 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 MTND1P17-201ENST00000448961 204 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 AL590705.4-201ENST00000532209 134 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 AK6P2-201ENST00000549020 471 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.41□□□□□ -2.18
ZNF560Q96MR9 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.41□□□□□ -2.18
ZNF560Q96MR9 MIR3688-2-201ENST00000636963 87 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 U6.108-201ENST00000637764 58 ntBASIC1.41□□□□□ -2.18
ZNF560Q96MR9 SNORD87-201ENST00000364849 89 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.4□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.533-201ENST00000384596 114 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RNU6-331P-201ENST00000384724 107 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RPL21P1-201ENST00000399532 476 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RPL30P16-201ENST00000419341 429 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 EIF1P1-201ENST00000421436 341 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.4□□□□□ -2.19
ZNF560Q96MR9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RPS26P45-201ENST00000471748 340 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 AC091179.3-201ENST00000474761 144 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.4□□□□□ -2.19
ZNF560Q96MR9 AC093303.1-201ENST00000514549 295 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 RNU1-54P-201ENST00000517181 120 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 AC005668.1-201ENST00000571142 476 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 MIR3662-201ENST00000637030 95 ntBASIC1.4□□□□□ -2.19
ZNF560Q96MR9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZNF560Q96MR9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.301-201ENST00000364990 103 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ZNF560Q96MR9 MRPL35P1-201ENST00000404272 572 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 USMG5P1-201ENST00000425964 177 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AC103851.1-201ENST00000506833 274 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 RNU6-273P-201ENST00000516937 96 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AL442163.3-201ENST00000554110 156 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 UBL5P4-201ENST00000562584 236 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AC022432.1-201ENST00000595739 310 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 AC090517.2-201ENST00000614966 680 ntBASIC1.39□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 RNU6-1215P-201ENST00000384441 102 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 MIR10B-201ENST00000385011 110 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 RNA5SP109-201ENST00000391010 116 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 RNU6-321P-201ENST00000410912 106 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
ZNF560Q96MR9 SNORD5.1-201ENST00000458800 75 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 AP003033.1-201ENST00000527244 415 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 AL137100.2-201ENST00000555786 315 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 AL078604.3-201ENST00000615580 211 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 AC068137.4-201ENST00000638485 296 ntBASIC1.38□□□□□ -2.19
ZNF560Q96MR9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 RNU6-727P-201ENST00000363592 107 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AL139396.1-201ENST00000421137 167 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 USP9YP30-201ENST00000430729 455 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AL445305.1-201ENST00000432577 575 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 RNU7-34P-201ENST00000459394 64 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AP000870.1-201ENST00000472927 406 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.37□□□□□ -2.19
ZNF560Q96MR9 RAB11AP2-201ENST00000545905 639 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
ZNF560Q96MR9 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AC010999.1-201ENST00000611856 324 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 AC093913.1-201ENST00000614178 329 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 U6.73-201ENST00000619194 103 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.37□□□□□ -2.19
ZNF560Q96MR9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.37□□□□□ -2.19
ZNF560Q96MR9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
ZNF560Q96MR9 SNORD115-47-201ENST00000391226 86 ntBASIC1.36□□□□□ -2.19
ZNF560Q96MR9 AL356776.1-201ENST00000406574 447 ntBASIC1.36□□□□□ -2.19
ZNF560Q96MR9 MTND1P34-201ENST00000438556 671 ntBASIC1.36□□□□□ -2.19
ZNF560Q96MR9 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
ZNF560Q96MR9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms