Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU7-167P-201ENST00000459160 62 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.05□□□□□ -2.42
CCDC42Q96M95 AC091951.3-201ENST00000504093 246 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 FGF7P1-201ENST00000582820 288 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 AC015726.2-201ENST00000620112 122 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 ZNF204P-201ENST00000416749 2397 ntBASIC-0.05□□□□□ -2.42
CCDC42Q96M95 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 RNU6-833P-201ENST00000363486 107 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 RNU6-108P-201ENST00000365558 107 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MTCO3P10-201ENST00000455912 772 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AF186996.7-201ENST00000492781 209 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 CYCTP-201ENST00000504253 315 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC091133.4-201ENST00000511142 308 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC074133.1-201ENST00000515696 183 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 RNU11-2P-201ENST00000516898 142 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MTND1P5-201ENST00000517906 940 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MRPS36P4-201ENST00000534436 298 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.06□□□□□ -2.42
CCDC42Q96M95 HIF1AP1-201ENST00000553642 175 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC022523.2-201ENST00000561045 150 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 EIF1P4-201ENST00000572664 335 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MIR4300-201ENST00000581016 96 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 RMST_3.1-201ENST00000611651 109 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC137590.2-201ENST00000619709 240 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 AC006435.5-201ENST00000624486 112 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MIR4315-1-201ENST00000636800 73 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MIR4315-2-201ENST00000640925 73 ntBASIC-0.06□□□□□ -2.42
CCDC42Q96M95 MIR1-1-201ENST00000362147 71 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 SNORD113.3-201ENST00000364630 78 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 SNORA62.5-201ENST00000516634 120 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 RNU6-341P-201ENST00000516973 96 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 AC104695.3-201ENST00000604052 296 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 AC092634.7-201ENST00000621022 103 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 AC010487.4-201ENST00000637027 61 ntBASIC-0.07□□□□□ -2.42
CCDC42Q96M95 MIR18A-201ENST00000362310 71 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 RNU6-245P-201ENST00000384020 107 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 RNU6-906P-201ENST00000384700 70 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 MIR891A-201ENST00000401237 79 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 MTND3P9-201ENST00000429526 346 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 HMGN2P26-201ENST00000463169 339 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AC005178.1-201ENST00000508392 440 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 MTND1P22-201ENST00000510572 951 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AP002004.2-201ENST00000531656 154 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CCDC42Q96M95 MIR6718-201ENST00000616153 80 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 uc_338.34-201ENST00000617467 174 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AL008636.1-201ENST00000625038 1018 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 AC073544.1-201ENST00000600110 1595 ntBASIC-0.08□□□□□ -2.42
CCDC42Q96M95 SNORA1B-201ENST00000362535 133 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 MIR598-201ENST00000384868 97 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 MIR518E-201ENST00000385252 88 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 SNORD73A-201ENST00000386062 65 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.09□□□□□ -2.42
CCDC42Q96M95 AC105417.1-201ENST00000514691 285 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 AP003327.1-201ENST00000529684 127 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 AC023932.2-201ENST00000603176 175 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 AC007684.1-201ENST00000609671 477 ntBASIC-0.09□□□□□ -2.42
CCDC42Q96M95 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
CCDC42Q96M95 RNU6-500P-201ENST00000362349 107 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 SNORD114-16-201ENST00000363044 70 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR1-2-201ENST00000384961 85 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR518A1-201ENST00000385068 85 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MTCO3P19-201ENST00000415864 321 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 HSFY5P-201ENST00000453726 309 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 SNORD65B-201ENST00000459126 73 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 RNU7-138P-201ENST00000459479 64 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.1□□□□□ -2.43
CCDC42Q96M95 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.1□□□□□ -2.43
CCDC42Q96M95 RNU7-41P-201ENST00000515917 61 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AC023157.2-201ENST00000540596 141 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AK6P2-201ENST00000549020 471 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR4509-3-201ENST00000578671 94 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR4509-2-201ENST00000583920 94 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AC091178.2-201ENST00000584401 117 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AL162730.1-201ENST00000605734 292 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 AC018645.2-201ENST00000609151 472 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR4509-1-201ENST00000618224 94 ntBASIC-0.1□□□□□ -2.43
CCDC42Q96M95 MIR411-201ENST00000362239 96 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 SNORA42.1-201ENST00000363515 137 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.11□□□□□ -2.43
CCDC42Q96M95 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.11□□□□□ -2.43
CCDC42Q96M95 AC091021.1-201ENST00000468051 388 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms