Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ZNF658B-202ENST00000615961 3375 ntBASIC2.56□□□□□ -2
VCPIP1Q96JH7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC002543.1-201ENST00000299783 1954 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 MIR21-201ENST00000362134 72 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORA25.1-201ENST00000362326 128 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 RNU1-72P-201ENST00000362976 153 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORD115-8-201ENST00000363856 82 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORD115-38-201ENST00000365037 82 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 RNU1-57P-201ENST00000384491 166 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 Y_RNA.570-201ENST00000384750 101 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AIMP1P2-201ENST00000425294 312 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC104332.1-201ENST00000440471 797 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
VCPIP1Q96JH7 RPL23AP3-201ENST00000453844 468 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC107393.1-201ENST00000512403 346 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 RNA5SP112-201ENST00000515937 99 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORA25.14-201ENST00000516481 132 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 SNORA31.16-201ENST00000516773 139 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AL162424.1-201ENST00000602325 221 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC010999.1-201ENST00000611856 324 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AL357075.2-201ENST00000614906 189 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC006001.4-201ENST00000622243 395 ntBASIC2.55□□□□□ -2
VCPIP1Q96JH7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
VCPIP1Q96JH7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCPIP1Q96JH7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCPIP1Q96JH7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 MIR411-201ENST00000362239 96 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNU6-774P-201ENST00000363238 107 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNU6-514P-201ENST00000384208 107 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNU6-651P-201ENST00000411040 105 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 AL121594.1-201ENST00000475906 575 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 SNORD116-28-201ENST00000516123 91 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 Y_RNA.679-201ENST00000516416 91 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNA5SP54-201ENST00000516951 92 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 AP002392.1-201ENST00000537692 208 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 CBX3P4-201ENST00000538909 354 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
VCPIP1Q96JH7 AC005176.2-201ENST00000596933 147 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 ZNF204P-201ENST00000416749 2397 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VCPIP1Q96JH7 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
VCPIP1Q96JH7 RNU6-486P-201ENST00000363116 107 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 SNORD114-30-201ENST00000364448 72 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 SNORA26.3-201ENST00000391119 136 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.590-201ENST00000410140 107 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AL390729.2-201ENST00000416137 156 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC009963.1-201ENST00000417265 157 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 MICF-203ENST00000432679 129 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 POLR2KP2-201ENST00000438155 177 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 snoU13.14-201ENST00000459372 104 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 snoU13.15-201ENST00000459407 104 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC140059.1-201ENST00000489238 361 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.53□□□□□ -2
VCPIP1Q96JH7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.53□□□□□ -2
VCPIP1Q96JH7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.53□□□□□ -2
VCPIP1Q96JH7 RPL21P9-201ENST00000556149 474 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 MZT1P2-201ENST00000604387 248 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.53□□□□□ -2
VCPIP1Q96JH7 CTSLP2-204ENST00000629029 392 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VCPIP1Q96JH7 AC010329.5-201ENST00000623497 2174 ntBASIC2.53□□□□□ -2
VCPIP1Q96JH7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 MTND5P35-201ENST00000557537 1720 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 MIR410-201ENST00000362222 80 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 SNORA72.2-201ENST00000365028 127 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 RNY4P28-201ENST00000365281 93 ntBASIC2.52□□□□□ -2.01
VCPIP1Q96JH7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms