Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 RNU4-49P-201ENST00000516080 140 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 AK6P2-201ENST00000549020 471 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 AL137100.2-201ENST00000555786 315 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 MIR4742-201ENST00000581069 85 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 MIR4769-201ENST00000584126 77 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 AC100812.1-201ENST00000607622 580 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 MIR6128-201ENST00000615528 109 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SYCP3Q8IZU3 RNU6-727P-201ENST00000363592 107 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 RNU6-510P-201ENST00000391239 108 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 RNU1-139P-201ENST00000391307 165 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 AL445305.1-201ENST00000432577 575 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 AC092989.1-201ENST00000481235 277 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 AC010999.1-201ENST00000611856 324 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 U6.108-201ENST00000637764 58 ntBASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SYCP3Q8IZU3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-1059P-201ENST00000363752 98 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-593P-201ENST00000364716 112 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-842P-201ENST00000384269 107 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-331P-201ENST00000384724 107 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 MRPL35P1-201ENST00000404272 572 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AC004965.1-201ENST00000413033 213 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RPS27P16-201ENST00000425758 201 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 MTND3P23-201ENST00000431980 347 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-329P-201ENST00000459618 107 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AC011352.1-201ENST00000512300 793 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 AP001485.1-201ENST00000604799 199 ntBASIC1.48□□□□□ -2.17
SYCP3Q8IZU3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 RPL21P1-201ENST00000399532 476 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 EIF1P1-201ENST00000421436 341 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 USP9YP16-201ENST00000430287 407 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 RPS27P1-201ENST00000450552 247 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 USP9YP23-201ENST00000455085 407 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC099513.1-201ENST00000490423 301 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 MTND5P5-201ENST00000503764 376 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC103851.1-201ENST00000506833 274 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 RNU6-718P-201ENST00000516166 105 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 MIR5695-201ENST00000579717 85 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC002553.4-201ENST00000616896 331 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AC073869.6-201ENST00000640656 341 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
SYCP3Q8IZU3 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 RNA5SP109-201ENST00000391010 116 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 TOMM22P2-201ENST00000430735 237 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 MTND4P18-201ENST00000447010 465 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 RNU1-123P-201ENST00000458950 160 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 RNU6-1016P-201ENST00000516689 94 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 APOOP3-201ENST00000536787 586 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AL442163.3-201ENST00000554110 156 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AL121579.1-201ENST00000555129 305 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AP000942.3-201ENST00000603702 160 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AC018462.2-201ENST00000605375 395 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AL355802.3-201ENST00000607571 545 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 U6.73-201ENST00000619194 103 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 AC006435.5-201ENST00000624486 112 ntBASIC1.46□□□□□ -2.18
SYCP3Q8IZU3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 Y_RNA.682-201ENST00000516457 100 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 RNU7-128P-201ENST00000517247 62 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC019176.1-201ENST00000518519 225 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AF235103.2-201ENST00000525753 346 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AP003033.1-201ENST00000527244 415 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 CBX3P8-201ENST00000532412 525 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC008269.2-201ENST00000561915 1105 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC004584.2-201ENST00000570407 410 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC005668.1-201ENST00000571142 476 ntBASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.45□□□□□ -2.18
SYCP3Q8IZU3 MIR5701-3-201ENST00000578890 82 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms