Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 MTCYBP39-201ENST00000437562 491 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 SPINT5P-201ENST00000448174 155 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU7-14P-201ENST00000459331 62 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RPL39P36-201ENST00000490784 156 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AC026782.1-201ENST00000512952 449 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 MIR3612-201ENST00000579753 87 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AL596327.1-201ENST00000603629 213 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AC006157.1-201ENST00000611750 366 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 AC026585.1-201ENST00000619582 524 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 MTND5P42-201ENST00000637720 498 ntBASIC-0.41□□□□□ -2.47
CSPG4Q6UVK1 RNU6-396P-201ENST00000365369 105 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AL031779.1-201ENST00000415663 330 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 MCFD2P1-201ENST00000417812 300 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 SUMO2P5-201ENST00000506790 245 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 RNU7-41P-201ENST00000515917 61 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 AC026616.1-201ENST00000523157 525 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 snoZ196.1-201ENST00000625269 89 ntBASIC-0.41□□□□□ -2.48
CSPG4Q6UVK1 RNU6-552P-201ENST00000362869 119 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AL049829.1-201ENST00000465411 156 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC091021.1-201ENST00000468051 388 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 RNU2-34P-201ENST00000516534 121 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AP001189.2-201ENST00000527320 189 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC012414.2-201ENST00000559474 187 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 MTND5P17-201ENST00000418405 1603 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AL139396.1-201ENST00000421137 167 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 USP9YP11-201ENST00000427537 717 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC109327.2-201ENST00000448339 378 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC074290.1-201ENST00000448883 135 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC087883.1-201ENST00000551882 391 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC006600.1-201ENST00000572529 153 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 MIR3165-201ENST00000579874 75 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 RPL17P51-201ENST00000605218 238 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 U6.42-201ENST00000618440 107 ntBASIC-0.42□□□□□ -2.48
CSPG4Q6UVK1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR377-201ENST00000362145 69 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNU6-127P-201ENST00000390897 107 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 U8.16-201ENST00000391279 133 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR300-201ENST00000401138 83 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AL590135.1-201ENST00000422215 156 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC019205.3-201ENST00000424573 156 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC016700.2-201ENST00000446011 156 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC015911.1-201ENST00000495111 156 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 DEFB131C-201ENST00000528817 165 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 ZNF971P-201ENST00000562068 1249 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC012409.4-201ENST00000612923 249 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC006504.8-201ENST00000621046 635 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AL162726.3-218ENST00000636401 95 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNU6-545P-201ENST00000362681 104 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 SNORA33-201ENST00000363664 130 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR454-201ENST00000390180 115 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RPL23AP30-201ENST00000432419 501 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AL139824.2-201ENST00000458731 1095 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNA5SP180-201ENST00000516181 101 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNY4P37-201ENST00000516225 96 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC090617.3-201ENST00000573670 475 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR4300-201ENST00000581016 96 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC100830.2-201ENST00000581636 240 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 VN1R87P-201ENST00000596706 487 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC120024.3-201ENST00000603167 156 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AC012467.1-201ENST00000607740 256 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AL096861.1-201ENST00000610899 123 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 AL356596.1-201ENST00000624230 379 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
CSPG4Q6UVK1 RNA5SP48-201ENST00000363969 126 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 RNY3P13-201ENST00000365542 102 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 PCNPP3-201ENST00000393579 471 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 CALM2P4-201ENST00000430810 426 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC007000.2-201ENST00000442564 487 ntBASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.44□□□□□ -2.48
CSPG4Q6UVK1 AC091951.3-201ENST00000504093 246 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms