Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL590705.4-201ENST00000532209 134 ntBASIC1.23□□□□□ -2.21
NIPAL3Q6P499 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
NIPAL3Q6P499 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
NIPAL3Q6P499 MIR4769-201ENST00000584126 77 ntBASIC1.23□□□□□ -2.21
NIPAL3Q6P499 U6.108-201ENST00000637764 58 ntBASIC1.23□□□□□ -2.21
NIPAL3Q6P499 RNU6-596P-201ENST00000365395 98 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 RNA5SP118-201ENST00000410385 109 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
NIPAL3Q6P499 USMG5P1-201ENST00000425964 177 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AC005002.2-201ENST00000438228 269 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 APOOP3-201ENST00000536787 586 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 RAB11AP2-201ENST00000545905 639 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 CYP3A52P-201ENST00000563326 91 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 TPRKBP2-201ENST00000565969 475 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AC021506.2-201ENST00000612354 169 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 AC093913.1-201ENST00000614178 329 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 ZNF299P-201ENST00000406845 1804 ntBASIC1.22□□□□□ -2.21
NIPAL3Q6P499 Y_RNA.157-201ENST00000363638 102 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 RNU6-1031P-201ENST00000384773 107 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AC245047.3-201ENST00000429428 127 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AP000870.1-201ENST00000472927 406 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AC093303.1-201ENST00000514549 295 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 MIR5695-201ENST00000579717 85 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AC022217.4-201ENST00000604389 163 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 AC010999.1-201ENST00000611856 324 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 U6.73-201ENST00000619194 103 ntBASIC1.21□□□□□ -2.22
NIPAL3Q6P499 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.21□□□□□ -2.22
NIPAL3Q6P499 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.184-201ENST00000363884 108 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.295-201ENST00000364918 102 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.405-201ENST00000383979 100 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.451-201ENST00000384200 100 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.490-201ENST00000384413 102 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.524-201ENST00000384564 100 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.561-201ENST00000384694 100 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.2□□□□□ -2.22
NIPAL3Q6P499 RNU6-720P-201ENST00000516363 108 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 SNORA31.10-201ENST00000516482 106 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 RNU6-1088P-201ENST00000516850 104 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 SUMO2P16-201ENST00000519475 264 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 FRG2DP-202ENST00000566967 323 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 EIF1P4-201ENST00000572664 335 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 MIR8054-201ENST00000620877 86 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
NIPAL3Q6P499 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU6-595P-201ENST00000363944 107 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU6-831P-201ENST00000384548 107 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MIR10B-201ENST00000385011 110 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MRPL42P3-201ENST00000401492 326 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AL139396.1-201ENST00000421137 167 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MTND4P18-201ENST00000447010 465 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU7-99P-201ENST00000516271 62 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU6-107P-201ENST00000516643 102 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RNU6-566P-201ENST00000516790 107 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.706-201ENST00000516933 99 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AC004584.2-201ENST00000570407 410 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MZT1P2-201ENST00000604387 248 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MIR6128-201ENST00000615528 109 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 U4.5-201ENST00000617137 123 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 MIR3662-201ENST00000637030 95 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AC068137.4-201ENST00000638485 296 ntBASIC1.19□□□□□ -2.22
NIPAL3Q6P499 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NIPAL3Q6P499 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NIPAL3Q6P499 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 RNU6-440P-201ENST00000390882 105 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 BTF3P4-201ENST00000418852 495 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 MTND3P23-201ENST00000431980 347 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 PGBD4P5-201ENST00000445958 426 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 RNU7-94P-201ENST00000459576 63 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 RNA5SP458-201ENST00000516188 119 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 Y_RNA.683-201ENST00000516508 93 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 RNU7-128P-201ENST00000517247 62 ntBASIC1.18□□□□□ -2.22
NIPAL3Q6P499 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.18□□□□□ -2.22
NIPAL3Q6P499 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.18□□□□□ -2.22
NIPAL3Q6P499 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms