Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
PCGF3Q3KNV8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCGF3Q3KNV8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.9□□□□□ -2.1
PCGF3Q3KNV8 Y_RNA.39-201ENST00000362620 98 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 RNU6-797P-201ENST00000363101 109 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.813-201ENST00000364639 102 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.460-201ENST00000384255 102 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 RN7SKP223-201ENST00000410582 62 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC016909.1-201ENST00000415916 166 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC074133.1-201ENST00000515696 183 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC027419.1-201ENST00000522976 328 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL442163.3-201ENST00000554110 156 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL080274.1-201ENST00000605565 220 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 AC009831.4-201ENST00000620744 325 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.9□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.197-201ENST00000364004 102 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.496-201ENST00000384444 101 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 SNORD78.2-201ENST00000391076 69 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 RNA5SP323-201ENST00000391094 133 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 OOSP1P1-201ENST00000423265 274 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 RPL23AP7-203ENST00000449021 469 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 VN1R91P-201ENST00000594377 169 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AL353149.1-201ENST00000610667 244 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AC006157.1-201ENST00000611750 366 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 AL160413.1-201ENST00000622780 310 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
PCGF3Q3KNV8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.445-201ENST00000384168 102 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RNA5SP475-201ENST00000410568 110 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RNU2-7P-201ENST00000410794 178 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 ELOCP21-201ENST00000412558 336 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RAB28P5-201ENST00000427490 651 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 AC018634.1-201ENST00000437554 401 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 FCF1P4-201ENST00000448326 183 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 CHEK2P4-201ENST00000450340 246 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 HMGN1P13-201ENST00000505795 138 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 RNU6-408P-201ENST00000515910 100 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 HSBP1P1-201ENST00000555205 166 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 MIR4648-201ENST00000580107 72 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 MIR4272-201ENST00000635924 64 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.88□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.5-201ENST00000362334 102 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.252-201ENST00000364556 101 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 RNY3P4-201ENST00000384428 101 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 Y_RNA.535-201ENST00000384612 99 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 AL117342.1-201ENST00000404861 406 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 CST2P1-201ENST00000425770 87 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 MIR4298-201ENST00000584380 73 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 AC011476.5-201ENST00000615594 130 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 AC138305.3-201ENST00000624988 240 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 MTND5P6-201ENST00000422338 1798 ntBASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PCGF3Q3KNV8 SNORA33-201ENST00000363664 130 ntBASIC1.86□□□□□ -2.11
PCGF3Q3KNV8 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms