Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1BQ00975 MTCO2P34-201ENST00000421994 607 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC133104.1-201ENST00000429100 218 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.41□□□□□ -2.34
CACNA1BQ00975 MTCO2P11-201ENST00000431069 680 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC245047.7-201ENST00000440265 293 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC073415.1-201ENST00000449240 153 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 HMGB1P29-201ENST00000505659 499 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC090142.3-201ENST00000519012 385 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AL137161.1-201ENST00000532231 390 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.41□□□□□ -2.34
CACNA1BQ00975 MIR4703-201ENST00000577728 79 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC068790.6-201ENST00000602558 258 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AL022161.1-201ENST00000604390 213 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 AC040896.1-201ENST00000613819 479 ntBASIC0.41□□□□□ -2.34
CACNA1BQ00975 ZNF204P-201ENST00000416749 2397 ntBASIC0.4□□□□□ -2.34
CACNA1BQ00975 RNU6-1123P-201ENST00000362347 106 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 RNU6-1187P-201ENST00000364771 110 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 RNU6-975P-201ENST00000384296 105 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 RNU6-1186P-201ENST00000410429 97 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC010154.1-201ENST00000425857 269 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 MTND3P9-201ENST00000429526 346 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 AL133217.1-201ENST00000450980 425 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 RPL39P38-201ENST00000467018 153 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC048334.1-201ENST00000477975 159 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.4□□□□□ -2.35
CACNA1BQ00975 RPL39P5-202ENST00000512505 151 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC010493.1-201ENST00000513479 292 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 SNORA70.22-201ENST00000517160 124 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC106038.2-201ENST00000520706 568 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC245884.10-201ENST00000597355 337 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC087683.2-201ENST00000611384 326 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC022960.3-201ENST00000619794 441 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC068792.1-201ENST00000621354 417 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 AC139792.3-201ENST00000623525 224 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 SNORA43.4-201ENST00000629559 138 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 MTND4P5-201ENST00000435821 1374 ntBASIC0.4□□□□□ -2.35
CACNA1BQ00975 RNU6-46P-201ENST00000383860 107 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-1127P-201ENST00000384580 107 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-1104P-201ENST00000384723 104 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-1031P-201ENST00000384773 107 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 BX295541.1-201ENST00000417774 250 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 NFU1P2-201ENST00000448700 469 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 NDUFB4P10-201ENST00000452541 359 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC067940.1-201ENST00000458411 300 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-612P-201ENST00000516909 102 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC022432.1-201ENST00000595739 310 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC064836.2-201ENST00000609491 462 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC021506.2-201ENST00000612354 169 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-541P-201ENST00000384709 110 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNY3P10-201ENST00000384764 102 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-57P-201ENST00000411348 103 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 MTND1P22-201ENST00000510572 951 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-1129P-201ENST00000515964 104 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-189P-201ENST00000516120 101 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 RNU6-323P-201ENST00000521915 107 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AL157687.1-201ENST00000554853 619 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.39□□□□□ -2.35
CACNA1BQ00975 AP000907.4-201ENST00000604143 237 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AL136370.1-201ENST00000608166 691 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 AL603839.4-201ENST00000624658 1005 ntBASIC0.39□□□□□ -2.35
CACNA1BQ00975 Y_RNA.293-201ENST00000364908 93 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 RNU6-933P-201ENST00000384424 107 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 Y_RNA.495-201ENST00000384435 112 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC025465.4-201ENST00000513422 638 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 SNORA31.2-201ENST00000516019 134 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC016256.1-201ENST00000547971 354 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 HIF1AP1-201ENST00000553642 175 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 TPRKBP2-201ENST00000565969 475 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC004223.2-201ENST00000590309 544 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC068647.2-201ENST00000637380 353 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 U6.108-201ENST00000637764 58 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 RNU6-82P-201ENST00000363970 107 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 RNU6-1240P-201ENST00000365155 104 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 MIR200A-201ENST00000384875 90 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 MRPL42P3-201ENST00000401492 326 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 AL606517.2-201ENST00000442855 241 ntBASIC0.38□□□□□ -2.35
CACNA1BQ00975 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.38□□□□□ -2.35
CACNA1BQ00975 AC005178.1-201ENST00000508392 440 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms