Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL138726.1-201ENST00000614873 333 ntBASIC0.04□□□□□ -2.4
SPCS3P61009 AC008133.2-201ENST00000624540 351 ntBASIC0.04□□□□□ -2.4
SPCS3P61009 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.03□□□□□ -2.4
SPCS3P61009 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.03□□□□□ -2.4
SPCS3P61009 ZNF114P1-201ENST00000453500 292 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 U8.21-201ENST00000459536 136 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 AK6P2-201ENST00000549020 471 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.03□□□□□ -2.4
SPCS3P61009 AL078603.1-201ENST00000603824 313 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 AP000240.1-201ENST00000609910 452 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 AC006435.5-201ENST00000624486 112 ntBASIC0.03□□□□□ -2.4
SPCS3P61009 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.02□□□□□ -2.41
SPCS3P61009 SNORA1B-201ENST00000362535 133 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNU6-833P-201ENST00000363486 107 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 SNORD87-201ENST00000364849 89 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNU6-1297P-201ENST00000384415 104 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 MIR499A-201ENST00000384903 122 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 MIR487A-201ENST00000385009 80 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 MIR450B-201ENST00000401182 78 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 MIR891A-201ENST00000401237 79 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNU2-29P-201ENST00000410423 189 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNA5SP511-201ENST00000410487 115 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNU6-195P-201ENST00000411352 109 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.02□□□□□ -2.41
SPCS3P61009 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.02□□□□□ -2.41
SPCS3P61009 HMGN2P26-201ENST00000463169 339 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AC010469.2-201ENST00000496412 480 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AC005178.1-201ENST00000508392 440 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RN7SKP164-201ENST00000516138 266 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 RNA5SP54-201ENST00000516951 92 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AC087854.1-201ENST00000519706 414 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.02□□□□□ -2.41
SPCS3P61009 AP002004.2-201ENST00000531656 154 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AL137161.1-201ENST00000532231 390 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 AC023157.2-201ENST00000540596 141 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 OR5AK4P-201ENST00000635912 903 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 MIR924-201ENST00000638017 53 ntBASIC0.02□□□□□ -2.41
SPCS3P61009 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
SPCS3P61009 RNA5SP432-201ENST00000362480 116 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 Y_RNA.164-201ENST00000363709 102 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 SSR1P2-201ENST00000415208 787 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.01□□□□□ -2.41
SPCS3P61009 AC009961.2-201ENST00000435771 251 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 SNORD65B-201ENST00000459126 73 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 RNU6-341P-201ENST00000516973 96 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 MTND1P35-201ENST00000526739 508 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.01□□□□□ -2.41
SPCS3P61009 MIR98-201ENST00000606724 119 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 AL008636.1-201ENST00000625038 1018 ntBASIC0.01□□□□□ -2.41
SPCS3P61009 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
SPCS3P61009 SNORD113.3-201ENST00000364630 78 ntBASIC0□□□□□ -2.41
SPCS3P61009 RNU4-45P-201ENST00000365469 141 ntBASIC0□□□□□ -2.41
SPCS3P61009 MTCO3P19-201ENST00000415864 321 ntBASIC0□□□□□ -2.41
SPCS3P61009 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0□□□□□ -2.41
SPCS3P61009 SNRPGP12-201ENST00000449481 213 ntBASIC0□□□□□ -2.41
SPCS3P61009 AL009048.1-201ENST00000450437 298 ntBASIC0□□□□□ -2.41
SPCS3P61009 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0□□□□□ -2.41
SPCS3P61009 RNU6-1096P-201ENST00000517089 102 ntBASIC0□□□□□ -2.41
SPCS3P61009 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0□□□□□ -2.41
SPCS3P61009 MIR4300-201ENST00000581016 96 ntBASIC0□□□□□ -2.41
SPCS3P61009 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0□□□□□ -2.41
SPCS3P61009 AC091178.2-201ENST00000584401 117 ntBASIC0□□□□□ -2.41
SPCS3P61009 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0□□□□□ -2.41
SPCS3P61009 MIR1-1-201ENST00000362147 71 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 SNORD44.1-201ENST00000363202 61 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNA5SP62-201ENST00000363457 110 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNU6-42P-201ENST00000384165 107 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNU6-606P-201ENST00000384721 111 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 MIR573-201ENST00000384964 99 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNU1-139P-201ENST00000391307 165 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AC091021.1-201ENST00000468051 388 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.01□□□□□ -2.41
SPCS3P61009 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.01□□□□□ -2.41
SPCS3P61009 AC097462.1-201ENST00000514125 324 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RNU11-2P-201ENST00000516898 142 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AC104383.1-201ENST00000530297 370 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 RPL21P9-201ENST00000556149 474 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.01□□□□□ -2.41
SPCS3P61009 AL022161.1-201ENST00000604390 213 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AC064836.2-201ENST00000609491 462 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 TUSC7.1-201ENST00000610969 165 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 uc_338.34-201ENST00000617467 174 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 AC015726.2-201ENST00000620112 122 ntBASIC-0.01□□□□□ -2.41
SPCS3P61009 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 SNORD115-8-201ENST00000363856 82 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 SNORD115-38-201ENST00000365037 82 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 MIR513B-201ENST00000385136 84 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
SPCS3P61009 AL049545.1-201ENST00000401856 572 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 RNU2-70P-201ENST00000410718 179 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.02□□□□□ -2.41
SPCS3P61009 MTCO3P10-201ENST00000455912 772 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-0.02□□□□□ -2.41
SPCS3P61009 AC074133.1-201ENST00000515696 183 ntBASIC-0.02□□□□□ -2.41
SPCS3P61009 RNU7-41P-201ENST00000515917 61 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms