Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 Y_RNA.295-201ENST00000364918 102 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 RNU6-793P-201ENST00000384233 104 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 RNU6-541P-201ENST00000384709 110 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 SNORD116-4-201ENST00000384733 96 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 SNORA12.1-201ENST00000390873 148 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 USP9YP30-201ENST00000430729 455 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.14□□□□□ -2.23
PKNOX1P55347 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.14□□□□□ -2.23
PKNOX1P55347 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.14□□□□□ -2.23
PKNOX1P55347 AC093303.1-201ENST00000514549 295 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 RNU1-142P-201ENST00000516682 145 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.14□□□□□ -2.23
PKNOX1P55347 AC134698.4-201ENST00000523451 826 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 AL390123.1-201ENST00000603216 237 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 MIR3662-201ENST00000637030 95 ntBASIC1.14□□□□□ -2.23
PKNOX1P55347 RNU6-595P-201ENST00000363944 107 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.13□□□□□ -2.23
PKNOX1P55347 Y_RNA.405-201ENST00000383979 100 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 Y_RNA.451-201ENST00000384200 100 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 RNU6-842P-201ENST00000384269 107 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 Y_RNA.524-201ENST00000384564 100 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 Y_RNA.561-201ENST00000384694 100 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 RNA5SP213-201ENST00000391031 106 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 RNA5SP118-201ENST00000410385 109 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.13□□□□□ -2.23
PKNOX1P55347 AC009161.1-201ENST00000417306 376 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.13□□□□□ -2.23
PKNOX1P55347 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.13□□□□□ -2.23
PKNOX1P55347 AC009474.2-201ENST00000451383 136 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 RNU6-566P-201ENST00000516790 107 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 AL590705.4-201ENST00000532209 134 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 AC022432.1-201ENST00000595739 310 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 AC090517.2-201ENST00000614966 680 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 MIR3688-2-201ENST00000636963 87 ntBASIC1.13□□□□□ -2.23
PKNOX1P55347 ZNF299P-201ENST00000406845 1804 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 SNORA7.1-201ENST00000363750 139 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU6-280P-201ENST00000364145 104 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 Y_RNA.301-201ENST00000364990 103 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU6-1031P-201ENST00000384773 107 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU4-62P-201ENST00000410125 130 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.12□□□□□ -2.23
PKNOX1P55347 MTND3P23-201ENST00000431980 347 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 MTND4P18-201ENST00000447010 465 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU7-95P-201ENST00000459222 64 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU7-175P-201ENST00000515915 61 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 CYP3A52P-201ENST00000563326 91 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 MIR5695-201ENST00000579717 85 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 MIR4273-201ENST00000582824 84 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 AL355802.3-201ENST00000607571 545 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 U4.5-201ENST00000617137 123 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 U6.73-201ENST00000619194 103 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.12□□□□□ -2.23
PKNOX1P55347 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.12□□□□□ -2.23
PKNOX1P55347 RNU6-1123P-201ENST00000362347 106 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 RNU6-222P-201ENST00000362438 107 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 Y_RNA.48-201ENST00000362710 103 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 Y_RNA.179-201ENST00000363844 90 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 RNU4-40P-201ENST00000364351 143 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 MIR764-201ENST00000390811 85 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 SNORD115-47-201ENST00000391226 86 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
PKNOX1P55347 AL356776.1-201ENST00000406574 447 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 RNU6-1186P-201ENST00000410429 97 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.11□□□□□ -2.23
PKNOX1P55347 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.11□□□□□ -2.23
PKNOX1P55347 AC091144.1-201ENST00000519573 138 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.11□□□□□ -2.23
PKNOX1P55347 MIR6128-201ENST00000615528 109 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 MIR8054-201ENST00000620877 86 ntBASIC1.11□□□□□ -2.23
PKNOX1P55347 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.11□□□□□ -2.23
PKNOX1P55347 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PKNOX1P55347 RNA5SP259-201ENST00000365541 109 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 Y_RNA.490-201ENST00000384413 102 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 Y_RNA.573-201ENST00000384763 105 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 RNU1-139P-201ENST00000391307 165 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 SNORA11.2-201ENST00000408318 127 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 SNX2P2-201ENST00000424553 323 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 AC245047.3-201ENST00000429428 127 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 MTND4LP16-201ENST00000440828 295 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 SNORD5.1-201ENST00000458800 75 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 RNU4-49P-201ENST00000516080 140 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 CBX3P8-201ENST00000532412 525 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 AL137100.2-201ENST00000555786 315 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 7SK.7-201ENST00000603504 247 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 AC010999.1-201ENST00000611856 324 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
PKNOX1P55347 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
PKNOX1P55347 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU6-1013P-201ENST00000384180 107 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU6-281P-201ENST00000384212 103 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 Y_RNA.453-201ENST00000384223 109 ntBASIC1.09□□□□□ -2.23
PKNOX1P55347 RNU6-950P-201ENST00000384651 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms