Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR548AO-201ENST00000579992 96 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 MIR4438-201ENST00000585271 93 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 AC002044.1-201ENST00000606707 158 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 AL031667.3-201ENST00000620124 655 ntBASIC-0.29□□□□□ -2.46
SRP9P49458 ZNF204P-201ENST00000416749 2397 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 RNU6-369P-201ENST00000362515 102 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 RNU6-302P-201ENST00000365249 107 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 MIR520C-201ENST00000385005 87 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 MIR625-201ENST00000385047 85 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 RNA5SP494-201ENST00000410653 129 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.3□□□□□ -2.46
SRP9P49458 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.3□□□□□ -2.46
SRP9P49458 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.3□□□□□ -2.46
SRP9P49458 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.3□□□□□ -2.46
SRP9P49458 AP001372.4-201ENST00000524889 472 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 AC104383.1-201ENST00000530297 370 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 AC141557.1-201ENST00000540982 400 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 AP000943.4-201ENST00000622912 357 ntBASIC-0.3□□□□□ -2.46
SRP9P49458 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 RNA5SP257-201ENST00000363023 116 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 RNU6-757P-201ENST00000410334 100 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.31□□□□□ -2.46
SRP9P49458 MRPS10P2-201ENST00000431226 381 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.31□□□□□ -2.46
SRP9P49458 AC112204.1-201ENST00000502591 103 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 RPL39P5-202ENST00000512505 151 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.31□□□□□ -2.46
SRP9P49458 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 RNU7-28P-201ENST00000516759 62 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 AC093027.1-201ENST00000546698 429 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.31□□□□□ -2.46
SRP9P49458 AC025449.1-201ENST00000603896 529 ntBASIC-0.31□□□□□ -2.46
SRP9P49458 SNORA1B-201ENST00000362535 133 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 SNORD118-201ENST00000363593 134 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 U8.7-201ENST00000364940 136 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 RNU6-533P-201ENST00000384144 107 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 RNA5SP496-201ENST00000391240 109 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 MIR891A-201ENST00000401237 79 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 MRPL42P2-201ENST00000403169 426 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 ZNF885P-201ENST00000420174 1098 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.32□□□□□ -2.46
SRP9P49458 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.32□□□□□ -2.46
SRP9P49458 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.32□□□□□ -2.46
SRP9P49458 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.32□□□□□ -2.46
SRP9P49458 SNORA25.17-201ENST00000517184 124 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 AC023442.1-201ENST00000531247 422 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 AC023157.2-201ENST00000540596 141 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.32□□□□□ -2.46
SRP9P49458 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.32□□□□□ -2.46
SRP9P49458 U6.114-201ENST00000636407 96 ntBASIC-0.32□□□□□ -2.46
SRP9P49458 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
SRP9P49458 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 RNU6-514P-201ENST00000384208 107 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 TRBVB-201ENST00000477100 408 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.33□□□□□ -2.46
SRP9P49458 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 RNA5SP94-201ENST00000516917 108 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 AC010376.1-201ENST00000522101 334 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 AC022616.3-201ENST00000523940 148 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.33□□□□□ -2.46
SRP9P49458 RBM11P1-201ENST00000604951 799 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 AL357075.2-201ENST00000614906 189 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 AC011155.2-201ENST00000623202 216 ntBASIC-0.33□□□□□ -2.46
SRP9P49458 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.33□□□□□ -2.46
SRP9P49458 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 RNA5SP482-201ENST00000391269 118 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 SNORA75.6-201ENST00000391318 127 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 RPS26P42-201ENST00000413485 326 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 AC091021.1-201ENST00000468051 388 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.34□□□□□ -2.46
SRP9P49458 RNU6-977P-201ENST00000516411 103 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.34□□□□□ -2.46
SRP9P49458 AC012433.1-201ENST00000588916 398 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 AC139792.3-201ENST00000623525 224 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 AC022418.1-201ENST00000624118 445 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 SCARNA4-201ENST00000629045 128 ntBASIC-0.34□□□□□ -2.46
SRP9P49458 RNU6-833P-201ENST00000363486 107 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 MIR329-2-201ENST00000385029 84 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 SNORD115.1-201ENST00000391109 76 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 MIR1185-2-201ENST00000408687 86 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 MTATP6P20-201ENST00000414147 562 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 RPS27AP14-201ENST00000422868 454 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 MRPS10P1-201ENST00000448483 130 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 AC007215.1-201ENST00000464893 276 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.35□□□□□ -2.47
SRP9P49458 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.35□□□□□ -2.47
SRP9P49458 AC010999.1-201ENST00000611856 324 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 AC104260.1-201ENST00000616660 539 ntBASIC-0.35□□□□□ -2.47
SRP9P49458 RNA5SP48-201ENST00000363969 126 ntBASIC-0.36□□□□□ -2.47
SRP9P49458 RNU6-266P-201ENST00000364225 107 ntBASIC-0.36□□□□□ -2.47
SRP9P49458 SNORD87-201ENST00000364849 89 ntBASIC-0.36□□□□□ -2.47
SRP9P49458 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.36□□□□□ -2.47
SRP9P49458 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms