Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.12□□□□□ -2.23
RORAP35398 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
RORAP35398 SNORA31.10-201ENST00000516482 106 ntBASIC1.12□□□□□ -2.23
RORAP35398 RNU6-314P-201ENST00000516574 104 ntBASIC1.12□□□□□ -2.23
RORAP35398 RNA5SP54-201ENST00000516951 92 ntBASIC1.12□□□□□ -2.23
RORAP35398 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.12□□□□□ -2.23
RORAP35398 AC245505.1-201ENST00000556398 224 ntBASIC1.12□□□□□ -2.23
RORAP35398 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.12□□□□□ -2.23
RORAP35398 POLR3GP2-201ENST00000588366 668 ntBASIC1.12□□□□□ -2.23
RORAP35398 SNORD11B-201ENST00000607707 90 ntBASIC1.12□□□□□ -2.23
RORAP35398 AC006504.8-201ENST00000621046 635 ntBASIC1.12□□□□□ -2.23
RORAP35398 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RORAP35398 RNU6-873P-201ENST00000363833 107 ntBASIC1.11□□□□□ -2.23
RORAP35398 Y_RNA.319-201ENST00000365138 92 ntBASIC1.11□□□□□ -2.23
RORAP35398 RNU6-245P-201ENST00000384020 107 ntBASIC1.11□□□□□ -2.23
RORAP35398 Y_RNA.554-201ENST00000384672 102 ntBASIC1.11□□□□□ -2.23
RORAP35398 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.11□□□□□ -2.23
RORAP35398 EIF1P1-201ENST00000421436 341 ntBASIC1.11□□□□□ -2.23
RORAP35398 MTND3P21-201ENST00000433774 331 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC005002.2-201ENST00000438228 269 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.11□□□□□ -2.23
RORAP35398 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.11□□□□□ -2.23
RORAP35398 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.11□□□□□ -2.23
RORAP35398 HMGN1P12-201ENST00000499125 195 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.11□□□□□ -2.23
RORAP35398 RNA5SP454-201ENST00000517231 127 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC024995.1-201ENST00000523014 93 ntBASIC1.11□□□□□ -2.23
RORAP35398 UBL5P4-201ENST00000562584 236 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.11□□□□□ -2.23
RORAP35398 FRG2DP-202ENST00000566967 323 ntBASIC1.11□□□□□ -2.23
RORAP35398 MIR5696-201ENST00000578474 85 ntBASIC1.11□□□□□ -2.23
RORAP35398 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
RORAP35398 AC022217.4-201ENST00000604389 163 ntBASIC1.11□□□□□ -2.23
RORAP35398 AL365434.2-201ENST00000607979 234 ntBASIC1.11□□□□□ -2.23
RORAP35398 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.11□□□□□ -2.23
RORAP35398 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
RORAP35398 AL133216.2-202ENST00000634512 349 ntBASIC1.11□□□□□ -2.23
RORAP35398 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
RORAP35398 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
RORAP35398 Y_RNA.100-201ENST00000363141 102 ntBASIC1.1□□□□□ -2.23
RORAP35398 SNORD116-11-201ENST00000383882 92 ntBASIC1.1□□□□□ -2.23
RORAP35398 Y_RNA.415-201ENST00000384012 112 ntBASIC1.1□□□□□ -2.23
RORAP35398 RNU6-17P-201ENST00000384245 107 ntBASIC1.1□□□□□ -2.23
RORAP35398 RNU6-18P-201ENST00000384527 107 ntBASIC1.1□□□□□ -2.23
RORAP35398 RNU6-306P-201ENST00000384617 107 ntBASIC1.1□□□□□ -2.23
RORAP35398 RNA5SP323-201ENST00000391094 133 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC008134.1-201ENST00000420943 193 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC243428.1-201ENST00000421099 264 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.1□□□□□ -2.23
RORAP35398 COX6CP14-201ENST00000469580 174 ntBASIC1.1□□□□□ -2.23
RORAP35398 RPS26P45-201ENST00000471748 340 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC091179.3-201ENST00000474761 144 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.1□□□□□ -2.23
RORAP35398 SNORA25.14-201ENST00000516481 132 ntBASIC1.1□□□□□ -2.23
RORAP35398 AL390123.1-201ENST00000603216 237 ntBASIC1.1□□□□□ -2.23
RORAP35398 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
RORAP35398 AC009248.2-201ENST00000619826 254 ntBASIC1.1□□□□□ -2.23
RORAP35398 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.1□□□□□ -2.23
RORAP35398 AC099654.5-201ENST00000636479 350 ntBASIC1.1□□□□□ -2.23
RORAP35398 RNU6-1240P-201ENST00000365155 104 ntBASIC1.09□□□□□ -2.23
RORAP35398 Y_RNA.436-201ENST00000384097 102 ntBASIC1.09□□□□□ -2.23
RORAP35398 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
RORAP35398 MIR513A1-201ENST00000385138 129 ntBASIC1.09□□□□□ -2.23
RORAP35398 AL356776.1-201ENST00000406574 447 ntBASIC1.09□□□□□ -2.23
RORAP35398 MIR1185-2-201ENST00000408687 86 ntBASIC1.09□□□□□ -2.23
RORAP35398 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
RORAP35398 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.09□□□□□ -2.23
RORAP35398 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
RORAP35398 AC010154.1-201ENST00000425857 269 ntBASIC1.09□□□□□ -2.23
RORAP35398 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.09□□□□□ -2.23
RORAP35398 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.23
RORAP35398 AC109635.3-201ENST00000529536 185 ntBASIC1.09□□□□□ -2.23
RORAP35398 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.09□□□□□ -2.23
RORAP35398 AC019193.3-201ENST00000609144 554 ntBASIC1.09□□□□□ -2.23
RORAP35398 AC021506.2-201ENST00000612354 169 ntBASIC1.09□□□□□ -2.23
RORAP35398 AC015540.1-201ENST00000615828 501 ntBASIC1.09□□□□□ -2.23
RORAP35398 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.09□□□□□ -2.23
RORAP35398 AC027514.1-201ENST00000588561 1603 ntBASIC1.08□□□□□ -2.24
RORAP35398 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RORAP35398 RNA5SP327-201ENST00000362494 101 ntBASIC1.08□□□□□ -2.24
RORAP35398 RNU6-727P-201ENST00000363592 107 ntBASIC1.08□□□□□ -2.24
RORAP35398 MIR153-2-201ENST00000385225 87 ntBASIC1.08□□□□□ -2.24
RORAP35398 RNU6-159P-201ENST00000391080 106 ntBASIC1.08□□□□□ -2.24
RORAP35398 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RORAP35398 SNX2P2-201ENST00000424553 323 ntBASIC1.08□□□□□ -2.24
RORAP35398 AL589823.1-201ENST00000429577 183 ntBASIC1.08□□□□□ -2.24
RORAP35398 MTATP6P13-201ENST00000438531 667 ntBASIC1.08□□□□□ -2.24
RORAP35398 MTATP6P26-201ENST00000445926 662 ntBASIC1.08□□□□□ -2.24
RORAP35398 PGBD4P5-201ENST00000445958 426 ntBASIC1.08□□□□□ -2.24
RORAP35398 RNU6-864P-201ENST00000516256 108 ntBASIC1.08□□□□□ -2.24
RORAP35398 RNU6-1088P-201ENST00000516850 104 ntBASIC1.08□□□□□ -2.24
RORAP35398 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.08□□□□□ -2.24
RORAP35398 CYP3A52P-201ENST00000563326 91 ntBASIC1.08□□□□□ -2.24
RORAP35398 AC136443.5-201ENST00000603741 370 ntBASIC1.08□□□□□ -2.24
RORAP35398 AC124303.1-201ENST00000605703 360 ntBASIC1.08□□□□□ -2.24
RORAP35398 AC040896.1-201ENST00000613819 479 ntBASIC1.08□□□□□ -2.24
RORAP35398 AC009033.1-201ENST00000624279 431 ntBASIC1.08□□□□□ -2.24
RORAP35398 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
RORAP35398 Y_RNA.116-201ENST00000363292 103 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms