Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL670379.3-201ENST00000605040 251 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 RPL17P51-201ENST00000605218 238 ntBASIC-0.44□□□□□ -2.48
SPTA1P02549 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.44□□□□□ -2.48
SPTA1P02549 RNU6-545P-201ENST00000362681 104 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-481P-201ENST00000384194 107 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MIR1253-201ENST00000408273 105 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC090844.1-201ENST00000422019 156 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 DEFB130D-201ENST00000426866 237 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.45□□□□□ -2.48
SPTA1P02549 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-0.45□□□□□ -2.48
SPTA1P02549 AC079354.2-201ENST00000453523 154 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC091951.3-201ENST00000504093 246 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-856P-201ENST00000516959 98 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 DEFB131D-201ENST00000526803 184 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MTND3P19-201ENST00000603825 345 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC012409.4-201ENST00000612923 249 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC138649.3-201ENST00000622154 254 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AL450472.1-202ENST00000637286 180 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MTND5P17-201ENST00000418405 1603 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-747P-201ENST00000390928 104 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-241P-201ENST00000391148 104 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MIR320C1-201ENST00000408566 88 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 SNORD100-201ENST00000408573 76 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC106883.1-201ENST00000418805 562 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC087499.4-201ENST00000448505 178 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 TPT1P7-201ENST00000458300 517 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU7-57P-201ENST00000459540 60 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.45□□□□□ -2.48
SPTA1P02549 RNU6-377P-201ENST00000515965 102 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 RNY4P37-201ENST00000516225 96 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 DEFB130C-202ENST00000530001 230 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MIR3115-201ENST00000577915 68 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MIR3192-201ENST00000584920 77 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC063944.3-201ENST00000609969 533 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MIR499B-201ENST00000636498 73 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 MTND5P33-201ENST00000571250 1450 ntBASIC-0.45□□□□□ -2.48
SPTA1P02549 AC015818.7-201ENST00000428754 109 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AL133396.1-201ENST00000432048 687 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AC087499.7-201ENST00000441958 109 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPTA1P02549 MTCO3P27-201ENST00000514397 196 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-848P-201ENST00000515948 107 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-617P-201ENST00000516147 107 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-473P-201ENST00000516164 107 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AC018448.1-201ENST00000552843 316 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AC090617.3-201ENST00000573670 475 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AC064872.1-201ENST00000604823 1072 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AL356596.1-201ENST00000624230 379 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.46□□□□□ -2.48
SPTA1P02549 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-97P-201ENST00000363387 104 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNA5SP48-201ENST00000363969 126 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 MIR578-201ENST00000384828 96 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 MIR454-201ENST00000390180 115 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RPL21P38-201ENST00000418090 167 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.46□□□□□ -2.48
SPTA1P02549 CALM2P4-201ENST00000430810 426 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 MTCO3P43-201ENST00000440974 771 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPTA1P02549 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU7-41P-201ENST00000515917 61 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 RNU6-504P-201ENST00000516568 104 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPTA1P02549 AC246785.4-201ENST00000605374 287 ntBASIC-0.46□□□□□ -2.48
SPTA1P02549 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 RNU6-137P-201ENST00000363680 108 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 RNU6-796P-201ENST00000391086 107 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 MIR300-201ENST00000401138 83 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 AC007327.1-201ENST00000447461 264 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 SNORA18.7-201ENST00000516910 131 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 AL596327.1-201ENST00000603629 213 ntBASIC-0.47□□□□□ -2.48
SPTA1P02549 MIR377-201ENST00000362145 69 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 MIR452-201ENST00000385020 85 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 MTND3P17-201ENST00000416968 344 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 AC007000.2-201ENST00000442564 487 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 RNU7-102P-201ENST00000458948 62 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 RNU7-14P-201ENST00000459331 62 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.47□□□□□ -2.49
SPTA1P02549 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.47□□□□□ -2.49
SPTA1P02549 AC093303.1-201ENST00000514549 295 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 AC023632.1-201ENST00000518463 375 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 AL512347.1-201ENST00000566420 503 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 FGF7P1-201ENST00000582820 288 ntBASIC-0.47□□□□□ -2.49
SPTA1P02549 RNY3P13-201ENST00000365542 102 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.48□□□□□ -2.49
SPTA1P02549 AL355143.1-201ENST00000407101 841 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms