| MT-ATP6 | P00846 | AP005530.1-201 | ENST00000572608 | 567 nt | TSL 3 BASIC | 1.24 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | TDRD15-202 | ENST00000622654 | 5805 nt | APPRIS P1 BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU6-595P-201 | ENST00000363944 | 107 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.405-201 | ENST00000383979 | 100 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.451-201 | ENST00000384200 | 100 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.524-201 | ENST00000384564 | 100 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.561-201 | ENST00000384694 | 100 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU6-440P-201 | ENST00000390882 | 105 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNA5SP118-201 | ENST00000410385 | 109 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU7-94P-201 | ENST00000459576 | 63 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | MTCYBP18-201 | ENST00000501056 | 747 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AP003033.1-201 | ENST00000527244 | 415 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AC010999.1-201 | ENST00000611856 | 324 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AC099654.5-201 | ENST00000636479 | 350 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | ZNF209P-201 | ENST00000593450 | 2304 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | ZNF72P-201 | ENST00000425869 | 1908 nt | BASIC | 1.23 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.89-201 | ENST00000363031 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.157-201 | ENST00000363638 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.436-201 | ENST00000384097 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU6-1013P-201 | ENST00000384180 | 107 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU6-831P-201 | ENST00000384548 | 107 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | Y_RNA.573-201 | ENST00000384763 | 105 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AC121342.1-201 | ENST00000423914 | 550 nt | TSL 3 BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | MTND4LP16-201 | ENST00000440828 | 295 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RPL39P38-201 | ENST00000467018 | 153 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | RNU6-273P-201 | ENST00000516937 | 96 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AC022690.2-201 | ENST00000525673 | 589 nt | TSL 3 BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AL513423.1-201 | ENST00000621695 | 132 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 1.22 | □□□□□ -2.21 | | |
| MT-ATP6 | P00846 | LINC00643-201 | ENST00000334389 | 3247 nt | TSL 2 BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-623P-201 | ENST00000363143 | 105 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | Y_RNA.184-201 | ENST00000363884 | 108 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-939P-201 | ENST00000384634 | 107 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL356776.1-201 | ENST00000406574 | 447 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC016907.1-201 | ENST00000419483 | 435 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MTND1P17-201 | ENST00000448961 | 204 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL133373.1-201 | ENST00000497098 | 94 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-1114P-201 | ENST00000516022 | 107 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-1088P-201 | ENST00000516850 | 104 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU1-54P-201 | ENST00000517181 | 120 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | EIF1P4-201 | ENST00000572664 | 335 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MIR5695-201 | ENST00000579717 | 85 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL162424.1-201 | ENST00000602325 | 221 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MIR7974-201 | ENST00000615835 | 79 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | GNAS-AS1_4.1-201 | ENST00000616546 | 112 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC100810.6-201 | ENST00000638068 | 285 nt | BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | EFCAB5-213 | ENST00000638539 | 168 nt | TSL 5 BASIC | 1.21 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | SNORA12.1-201 | ENST00000390873 | 148 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU1-139P-201 | ENST00000391307 | 165 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | TOMM22P2-201 | ENST00000430735 | 237 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MTND3P23-201 | ENST00000431980 | 347 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AP001043.2-201 | ENST00000434589 | 288 nt | TSL 3 BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MYCBP2-AS1-203 | ENST00000450627 | 349 nt | TSL 3 BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | Y_RNA.683-201 | ENST00000516508 | 93 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-566P-201 | ENST00000516790 | 107 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC091144.1-201 | ENST00000519573 | 138 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC012557.2-201 | ENST00000605919 | 418 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC100812.1-201 | ENST00000607622 | 580 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC073349.3-201 | ENST00000617616 | 186 nt | BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | LINC01359-207 | ENST00000634799 | 487 nt | TSL 5 BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | EMCN-202 | ENST00000305864 | 1575 nt | TSL 1 (best) BASIC | 1.2 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RPL37P10-201 | ENST00000412884 | 288 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | USP9YP16-201 | ENST00000430287 | 407 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | USP9YP30-201 | ENST00000430729 | 455 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | USP9YP23-201 | ENST00000455085 | 407 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC105313.1-201 | ENST00000509121 | 353 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC010598.1-201 | ENST00000510378 | 103 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-720P-201 | ENST00000516363 | 108 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | Y_RNA.706-201 | ENST00000516933 | 99 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU1-92P-201 | ENST00000517017 | 135 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | LINC02293-201 | ENST00000548335 | 574 nt | TSL 5 BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL512598.1-201 | ENST00000610158 | 273 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL021879.1-201 | ENST00000611756 | 288 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC018630.2-201 | ENST00000534866 | 2403 nt | BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | UHRF1BP1L-203 | ENST00000545232 | 4088 nt | TSL 1 (best) BASIC | 1.19 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU6-457P-201 | ENST00000363999 | 107 nt | BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | SNORD5.1-201 | ENST00000458800 | 75 nt | BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RNU1-123P-201 | ENST00000458950 | 160 nt | BASIC | 1.18 | □□□□□ -2.22 | | |
| MT-ATP6 | P00846 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 1.18 | □□□□□ -2.22 | | |