Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 CPDP1-201ENST00000579660 283 ntBASIC0.56□□□□□ -2.32
GMDSO60547 AC092747.3-201ENST00000603769 301 ntBASIC0.56□□□□□ -2.32
GMDSO60547 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
GMDSO60547 AL603755.1-201ENST00000619504 163 ntBASIC0.56□□□□□ -2.32
GMDSO60547 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
GMDSO60547 RNU6-137P-201ENST00000363680 108 ntBASIC0.55□□□□□ -2.32
GMDSO60547 RNU6-17P-201ENST00000384245 107 ntBASIC0.55□□□□□ -2.32
GMDSO60547 RNU6-18P-201ENST00000384527 107 ntBASIC0.55□□□□□ -2.32
GMDSO60547 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
GMDSO60547 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
GMDSO60547 SNORD37.1-201ENST00000390968 65 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AL663109.1-201ENST00000411498 844 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.55□□□□□ -2.32
GMDSO60547 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.55□□□□□ -2.32
GMDSO60547 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.55□□□□□ -2.32
GMDSO60547 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
GMDSO60547 DEFB108E-201ENST00000524692 240 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AC100830.2-201ENST00000581636 240 ntBASIC0.55□□□□□ -2.32
GMDSO60547 MIR4438-201ENST00000585271 93 ntBASIC0.55□□□□□ -2.32
GMDSO60547 Z94722.1-201ENST00000604328 474 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AL136370.1-201ENST00000608166 691 ntBASIC0.55□□□□□ -2.32
GMDSO60547 AC068137.4-201ENST00000638485 296 ntBASIC0.55□□□□□ -2.32
GMDSO60547 ELL2P3-201ENST00000457883 1602 ntBASIC0.54□□□□□ -2.32
GMDSO60547 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
GMDSO60547 RNU6-163P-201ENST00000384396 106 ntBASIC0.54□□□□□ -2.32
GMDSO60547 RNY3P9-201ENST00000384727 106 ntBASIC0.54□□□□□ -2.32
GMDSO60547 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.54□□□□□ -2.32
GMDSO60547 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
GMDSO60547 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.54□□□□□ -2.32
GMDSO60547 AC073464.1-201ENST00000429823 534 ntBASIC0.54□□□□□ -2.32
GMDSO60547 MRPS10P2-201ENST00000431226 381 ntBASIC0.54□□□□□ -2.32
GMDSO60547 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.54□□□□□ -2.32
GMDSO60547 TPT1P7-201ENST00000458300 517 ntBASIC0.54□□□□□ -2.32
GMDSO60547 RPS29P1-201ENST00000465274 159 ntBASIC0.54□□□□□ -2.32
GMDSO60547 SNORA19.2-201ENST00000516013 114 ntBASIC0.54□□□□□ -2.32
GMDSO60547 SNORA25.14-201ENST00000516481 132 ntBASIC0.54□□□□□ -2.32
GMDSO60547 AP002001.1-203ENST00000534002 267 ntBASIC0.54□□□□□ -2.32
GMDSO60547 AC011604.1-201ENST00000545978 196 ntBASIC0.54□□□□□ -2.32
GMDSO60547 FRG2DP-202ENST00000566967 323 ntBASIC0.54□□□□□ -2.32
GMDSO60547 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
GMDSO60547 PRELID3BP2-201ENST00000605362 201 ntBASIC0.54□□□□□ -2.32
GMDSO60547 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
GMDSO60547 SNORD115-32-201ENST00000364079 82 ntBASIC0.53□□□□□ -2.32
GMDSO60547 RNU4-9P-201ENST00000364951 139 ntBASIC0.53□□□□□ -2.32
GMDSO60547 SNORA75.2-201ENST00000391138 150 ntBASIC0.53□□□□□ -2.32
GMDSO60547 SNORA75.3-201ENST00000391231 150 ntBASIC0.53□□□□□ -2.32
GMDSO60547 AL445305.1-201ENST00000432577 575 ntBASIC0.53□□□□□ -2.32
GMDSO60547 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.53□□□□□ -2.32
GMDSO60547 AC245047.8-201ENST00000456455 284 ntBASIC0.53□□□□□ -2.32
GMDSO60547 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.53□□□□□ -2.32
GMDSO60547 RNU2-56P-201ENST00000516826 190 ntBASIC0.53□□□□□ -2.32
GMDSO60547 RPL21P9-201ENST00000556149 474 ntBASIC0.53□□□□□ -2.32
GMDSO60547 MIR5692C1-201ENST00000585309 91 ntBASIC0.53□□□□□ -2.32
GMDSO60547 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.53□□□□□ -2.32
GMDSO60547 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
GMDSO60547 MIR6788-201ENST00000618842 66 ntBASIC0.53□□□□□ -2.32
GMDSO60547 RNU6-280P-201ENST00000364145 104 ntBASIC0.52□□□□□ -2.33
GMDSO60547 SNORD87-201ENST00000364849 89 ntBASIC0.52□□□□□ -2.33
GMDSO60547 RNU6-1103P-201ENST00000384150 107 ntBASIC0.52□□□□□ -2.33
GMDSO60547 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
GMDSO60547 CALM2P4-201ENST00000430810 426 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AL353572.1-201ENST00000442490 417 ntBASIC0.52□□□□□ -2.33
GMDSO60547 MRPS10P1-201ENST00000448483 130 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC093850.1-201ENST00000454121 251 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.52□□□□□ -2.33
GMDSO60547 AL049830.1-201ENST00000468034 425 ntBASIC0.52□□□□□ -2.33
GMDSO60547 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.52□□□□□ -2.33
GMDSO60547 Y_RNA.654-201ENST00000497848 106 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC113410.1-201ENST00000505029 247 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC091885.1-201ENST00000506658 268 ntBASIC0.52□□□□□ -2.33
GMDSO60547 RNU7-12P-201ENST00000516030 62 ntBASIC0.52□□□□□ -2.33
GMDSO60547 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.52□□□□□ -2.33
GMDSO60547 AC004812.1-201ENST00000540773 146 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC040904.1-201ENST00000590850 223 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC004832.4-201ENST00000608952 331 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC017083.3-201ENST00000609955 700 ntBASIC0.52□□□□□ -2.33
GMDSO60547 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.52□□□□□ -2.33
GMDSO60547 AC091931.1-201ENST00000623488 728 ntBASIC0.52□□□□□ -2.33
GMDSO60547 MIR6079-201ENST00000635807 62 ntBASIC0.52□□□□□ -2.33
GMDSO60547 Y_RNA.169-201ENST00000363745 96 ntBASIC0.51□□□□□ -2.33
GMDSO60547 MIR153-2-201ENST00000385225 87 ntBASIC0.51□□□□□ -2.33
GMDSO60547 RNU6-1158P-201ENST00000391167 107 ntBASIC0.51□□□□□ -2.33
GMDSO60547 MIR548J-201ENST00000408833 112 ntBASIC0.51□□□□□ -2.33
GMDSO60547 MTCO3P19-201ENST00000415864 321 ntBASIC0.51□□□□□ -2.33
GMDSO60547 AL035398.1-201ENST00000430869 322 ntBASIC0.51□□□□□ -2.33
GMDSO60547 AL031667.1-201ENST00000440222 725 ntBASIC0.51□□□□□ -2.33
GMDSO60547 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.51□□□□□ -2.33
GMDSO60547 AC092436.3-201ENST00000511788 257 ntBASIC0.51□□□□□ -2.33
GMDSO60547 Y_RNA.676-201ENST00000516393 96 ntBASIC0.51□□□□□ -2.33
GMDSO60547 RNU6-1038P-201ENST00000516516 104 ntBASIC0.51□□□□□ -2.33
GMDSO60547 RNU6-58P-201ENST00000517143 103 ntBASIC0.51□□□□□ -2.33
GMDSO60547 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.51□□□□□ -2.33
GMDSO60547 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.51□□□□□ -2.33
GMDSO60547 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.51□□□□□ -2.33
GMDSO60547 RNU6-1335P-201ENST00000365426 107 ntBASIC0.5□□□□□ -2.33
GMDSO60547 RNA5SP482-201ENST00000391269 118 ntBASIC0.5□□□□□ -2.33
GMDSO60547 U8.16-201ENST00000391279 133 ntBASIC0.5□□□□□ -2.33
GMDSO60547 MTCO2P16-201ENST00000436962 677 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms