Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC007969.2-201ENST00000441891 191 ntBASIC3□□□□□ -1.93
FOXN1O15353 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3□□□□□ -1.93
FOXN1O15353 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3□□□□□ -1.93
FOXN1O15353 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3□□□□□ -1.93
FOXN1O15353 MIR5692C2-201ENST00000577959 77 ntBASIC3□□□□□ -1.93
FOXN1O15353 MIR5571-201ENST00000577998 113 ntBASIC3□□□□□ -1.93
FOXN1O15353 MIR3145-201ENST00000580727 82 ntBASIC3□□□□□ -1.93
FOXN1O15353 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3□□□□□ -1.93
FOXN1O15353 AL365222.1-201ENST00000614661 98 ntBASIC3□□□□□ -1.93
FOXN1O15353 MIR6076-201ENST00000617521 113 ntBASIC3□□□□□ -1.93
FOXN1O15353 5S_rRNA.12-201ENST00000617631 107 ntBASIC3□□□□□ -1.93
FOXN1O15353 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
FOXN1O15353 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
FOXN1O15353 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
FOXN1O15353 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
FOXN1O15353 RNU4-80P-201ENST00000363200 141 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 RNU6-818P-201ENST00000364837 108 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 Y_RNA.488-201ENST00000384403 102 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 RNU6-417P-201ENST00000384712 107 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 Y_RNA.571-201ENST00000384753 98 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 MIR544A-201ENST00000384855 91 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AC074117.2-201ENST00000417130 397 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AL358075.3-201ENST00000426289 226 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AL162725.1-201ENST00000435405 301 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 RPS15AP5-201ENST00000436276 388 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXN1O15353 GPM6BP3-201ENST00000442797 145 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AC005042.3-201ENST00000453230 174 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXN1O15353 snoU13.6-201ENST00000458785 104 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.99□□□□□ -1.93
FOXN1O15353 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.99□□□□□ -1.93
FOXN1O15353 RNU5F-8P-201ENST00000515941 111 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 RNU6-191P-201ENST00000516295 94 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 HSPE1P4-201ENST00000550617 308 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 MIR4474-201ENST00000579189 78 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.99□□□□□ -1.93
FOXN1O15353 AL138963.2-201ENST00000605137 226 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 snoU13.31-201ENST00000607291 104 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 AL138880.2-201ENST00000616214 239 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 U2.21-201ENST00000637295 81 ntBASIC2.99□□□□□ -1.93
FOXN1O15353 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
FOXN1O15353 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
FOXN1O15353 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
FOXN1O15353 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
FOXN1O15353 Y_RNA.101-201ENST00000363154 102 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 RNU6-778P-201ENST00000363269 103 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 SNORD115-8-201ENST00000363856 82 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 SNORD115-38-201ENST00000365037 82 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 SNORA25.9-201ENST00000365087 128 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 RNU6-449P-201ENST00000383914 107 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 Y_RNA.400-201ENST00000383963 111 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 RNU6-1168P-201ENST00000390831 104 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.98□□□□□ -1.93
FOXN1O15353 TRIAP1P1-201ENST00000427062 225 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 MTATP6P7-201ENST00000453315 681 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 AP000705.1-201ENST00000454567 350 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 RNU6-1198P-201ENST00000516904 67 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 AC016256.1-201ENST00000547971 354 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 AL356157.2-201ENST00000605122 111 ntBASIC2.98□□□□□ -1.93
FOXN1O15353 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
FOXN1O15353 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXN1O15353 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU6-873P-201ENST00000363833 107 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU6-217P-201ENST00000384164 104 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 Y_RNA.586-201ENST00000391146 98 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU2-2P-201ENST00000410396 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU6-321P-201ENST00000410912 106 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN1O15353 AC108667.1-201ENST00000428618 249 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 HMGN2P20-201ENST00000437531 273 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXN1O15353 RNA5SP272-201ENST00000516095 111 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 SUMO2P18-201ENST00000518873 252 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.97□□□□□ -1.93
FOXN1O15353 AC233702.2-202ENST00000562547 291 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AL133393.1-201ENST00000603277 287 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 HSPE1P7-201ENST00000604681 321 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AL670379.2-201ENST00000604983 252 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AC019159.1-201ENST00000605094 187 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU2-4P-201ENST00000606190 192 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AL008718.3-201ENST00000610217 321 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 FTX_3.1-201ENST00000610451 147 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.15-201ENST00000611544 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AC010999.1-201ENST00000611856 324 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.16-201ENST00000613119 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.12-201ENST00000613778 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.9-201ENST00000615427 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.11-201ENST00000616345 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.2-201ENST00000616535 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AC068831.7-201ENST00000616954 363 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.3-201ENST00000617785 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.19-201ENST00000618602 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 RNU2-1-201ENST00000618664 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.6-201ENST00000619225 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.5-201ENST00000619465 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 U2.10-201ENST00000620268 191 ntBASIC2.97□□□□□ -1.93
FOXN1O15353 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN1O15353 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms