Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 MIR1185-2-201ENST00000408687 86 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 MTCO2P19-201ENST00000427513 598 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL035398.1-201ENST00000430869 322 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL445305.1-201ENST00000432577 575 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AC093850.1-201ENST00000454121 251 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 MTCO2P4-201ENST00000517968 247 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AC016957.1-201ENST00000534895 309 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 SNORA4-201ENST00000584302 138 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AC092747.3-201ENST00000603769 301 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 Z94722.1-201ENST00000604328 474 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL357078.3-201ENST00000607528 618 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 SNORD11B-201ENST00000607707 90 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 MIR8076-201ENST00000611401 83 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL354950.2-201ENST00000617939 290 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 AL442644.1-201ENST00000454390 3105 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-137P-201ENST00000363680 108 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-424P-201ENST00000384367 105 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-348P-201ENST00000384386 107 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 RNY3P9-201ENST00000384727 106 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 MIR521-1-201ENST00000384902 87 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 Z82188.1-201ENST00000436709 154 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AP002001.1-203ENST00000534002 267 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC004223.2-201ENST00000590309 544 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC040904.1-201ENST00000590850 223 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC087683.1-201ENST00000591187 441 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AL096861.1-201ENST00000610899 123 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 RMST_2.1-201ENST00000617263 136 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC072046.2-201ENST00000618366 268 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 AC005609.4-201ENST00000625071 447 ntBASIC0.42□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.167-201ENST00000363735 109 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 RNU4-12P-201ENST00000365233 139 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 RNU4-20P-201ENST00000365601 151 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.415-201ENST00000384012 112 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 AL451046.2-201ENST00000403074 277 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 MTCO2P16-201ENST00000436962 677 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 AL359672.1-201ENST00000442302 409 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 AC079354.2-201ENST00000453523 154 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 OR9P1P-201ENST00000496431 281 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 APOOP3-201ENST00000536787 586 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 AL162424.1-201ENST00000602325 221 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 PRELID3BP2-201ENST00000605362 201 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 FAM157A-202ENST00000615155 405 ntBASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
TRAV41A0A0B4J266 SNORD50.1-201ENST00000362987 71 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-727P-201ENST00000363592 107 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 SNORD115-8-201ENST00000363856 82 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RNU1-133P-201ENST00000364867 167 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 SNORD115-38-201ENST00000365037 82 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-245P-201ENST00000384020 107 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-38P-201ENST00000384085 107 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 SNORD116-13-201ENST00000384408 92 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 MRPS10P2-201ENST00000431226 381 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AL606489.2-201ENST00000433886 234 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 MTND1P27-201ENST00000451117 902 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC233266.1-201ENST00000454518 96 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AL049830.1-201ENST00000468034 425 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC022493.2-201ENST00000506122 481 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC091133.4-201ENST00000511142 308 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RNA5SP121-201ENST00000516537 101 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 RN7SKP287-201ENST00000516546 266 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AP003484.1-201ENST00000530974 250 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 MIR3908-201ENST00000579798 126 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 MIR4438-201ENST00000585271 93 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AL117336.2-201ENST00000602435 335 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC093424.1-201ENST00000604999 338 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC017083.3-201ENST00000609955 700 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 AC242852.1-201ENST00000612151 96 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 MTND4P12-201ENST00000498999 1377 ntBASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
TRAV41A0A0B4J266 U3.8-201ENST00000363675 217 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-82P-201ENST00000363970 107 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 Y_RNA.269-201ENST00000364685 89 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU6-1103P-201ENST00000384150 107 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RNU5A-2P-201ENST00000384337 116 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 MIR320B2-201ENST00000408479 138 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AC104332.1-201ENST00000440471 797 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 RPEP5-201ENST00000441137 268 ntBASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV41A0A0B4J266 NDUFB4P10-201ENST00000452541 359 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms