Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 SEPT14P17-201ENST00000617978 177 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 AP002371.2-201ENST00000624450 503 ntBASIC0.17□□□□□ -2.38
TRAV1-1A0A0B4J248 MIRLET7D-201ENST00000362263 87 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-606P-201ENST00000384721 111 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU6-1106P-201ENST00000390845 107 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AC104332.1-201ENST00000440471 797 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 ZNF114P1-201ENST00000453500 292 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 RNU7-138P-201ENST00000459479 64 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 RNA5SP454-201ENST00000517231 127 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 MTND1P5-201ENST00000517906 940 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 MRPS36P4-201ENST00000534436 298 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AK6P2-201ENST00000549020 471 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 MIR8087-201ENST00000612745 78 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 7SK.10-201ENST00000621414 298 ntBASIC0.16□□□□□ -2.38
TRAV1-1A0A0B4J248 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
TRAV1-1A0A0B4J248 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.100-201ENST00000363141 102 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 RNY4P34-201ENST00000364779 95 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-245P-201ENST00000384020 107 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD73A-201ENST00000386062 65 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR320B2-201ENST00000408479 138 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AP000870.1-201ENST00000472927 406 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD111.1-201ENST00000516421 86 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 ELOCP32-201ENST00000548625 324 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AC023827.1-201ENST00000569247 97 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 TUSC7.1-201ENST00000610969 165 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 RMST_3.1-201ENST00000611651 109 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 AC122133.1-201ENST00000613964 233 ntBASIC0.15□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR330-201ENST00000362196 94 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-137P-201ENST00000363680 108 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD115-8-201ENST00000363856 82 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD115-38-201ENST00000365037 82 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.540-201ENST00000384638 111 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR1185-1-201ENST00000408598 86 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-195P-201ENST00000411352 109 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AL663109.1-201ENST00000411498 844 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC091133.4-201ENST00000511142 308 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU7-12P-201ENST00000516030 62 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC027288.2-201ENST00000553028 243 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC234772.3-201ENST00000602277 528 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 7SK.7-201ENST00000603504 247 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD11B-201ENST00000607707 90 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC007014.2-201ENST00000615581 479 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR6779-201ENST00000617283 64 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC137590.2-201ENST00000619709 240 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AC006435.5-201ENST00000624486 112 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR6079-201ENST00000635807 62 ntBASIC0.14□□□□□ -2.39
TRAV1-1A0A0B4J248 AL390237.1-201ENST00000404226 1415 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.85-201ENST00000363014 111 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.265-201ENST00000364677 108 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.330-201ENST00000365230 109 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-1327P-201ENST00000365302 105 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-716P-201ENST00000365621 103 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR526A1-201ENST00000384897 85 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-903P-201ENST00000391270 109 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR450B-201ENST00000401182 78 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-177P-201ENST00000411257 104 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MTCO2P8-201ENST00000412213 658 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 Z99497.1-201ENST00000421282 135 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MTND3P9-201ENST00000429526 346 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RPL31P35-201ENST00000431058 377 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AP003461.1-201ENST00000528866 78 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 HIF1AP1-201ENST00000553642 175 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MTND1P8-201ENST00000571424 950 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AC011195.1-201ENST00000578177 177 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR4514-201ENST00000581410 57 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 Z84480.1-201ENST00000605131 311 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AL391834.2-201ENST00000609982 546 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 U2.17-201ENST00000611454 95 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AL136317.1-201ENST00000612653 226 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 OR5AK4P-201ENST00000635912 903 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 ZNF204P-201ENST00000416749 2397 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 AC005592.1-201ENST00000566527 1640 ntBASIC0.13□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU5F-7P-201ENST00000363696 115 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORA36.2-201ENST00000384004 127 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-784P-201ENST00000384330 106 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms