Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 SNORA12.1-201ENST00000390873 148 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AL590002.1-201ENST00000406554 418 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 BTF3P4-201ENST00000418852 495 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AC108667.1-201ENST00000428618 249 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 NDUFA5P4-201ENST00000436704 385 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AC005002.2-201ENST00000438228 269 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 SEPT14P3-201ENST00000439401 183 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AL732372.2-207ENST00000445840 183 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 SEPT14P2-201ENST00000453405 183 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 RNU7-66P-201ENST00000459469 62 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 SEPT14P4-201ENST00000513445 186 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 RNA5SP54-201ENST00000516951 92 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 FO082796.1-201ENST00000523795 183 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AK6P2-201ENST00000549020 471 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.88□□□□□ -2.27
LRRC42Q9Y546 MIR3664-201ENST00000579074 99 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 AL390123.1-201ENST00000603216 237 ntBASIC0.88□□□□□ -2.27
LRRC42Q9Y546 SNORD87-201ENST00000364849 89 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU4-9P-201ENST00000364951 139 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU6-790P-201ENST00000384479 105 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU6-1031P-201ENST00000384773 107 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 MIR32-201ENST00000384965 70 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU6-482P-201ENST00000391068 107 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU6-908P-201ENST00000410160 94 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.615-201ENST00000410769 117 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 AL590632.1-201ENST00000424289 371 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.87□□□□□ -2.27
LRRC42Q9Y546 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.87□□□□□ -2.27
LRRC42Q9Y546 AL353572.1-201ENST00000442490 417 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 MTND1P11-201ENST00000456661 876 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 HMGN2P26-201ENST00000463169 339 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.87□□□□□ -2.27
LRRC42Q9Y546 MTCO2P30-201ENST00000503662 364 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU1-142P-201ENST00000516682 145 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RN7SKP88-201ENST00000516847 250 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 RNU6-58P-201ENST00000517143 103 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 AC027288.2-201ENST00000553028 243 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 7SK.8-201ENST00000612110 250 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 7SK.11-201ENST00000615477 250 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 7SK.13-201ENST00000622040 250 ntBASIC0.87□□□□□ -2.27
LRRC42Q9Y546 MTND4P12-201ENST00000498999 1377 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AL391987.6-201ENST00000305671 199 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.51-201ENST00000362725 102 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 RNU6-1252P-201ENST00000363054 104 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.319-201ENST00000365138 92 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 SNORD116-1-201ENST00000384335 95 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 RNU6-950P-201ENST00000384651 107 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 MIR764-201ENST00000390811 85 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 Z82205.1-201ENST00000428456 297 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AL445305.1-201ENST00000432577 575 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 MTCO3P18-201ENST00000440206 761 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 PCMTD1P1-201ENST00000455560 355 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AC107401.1-201ENST00000503426 685 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 RNU6-1281P-201ENST00000516223 105 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.704-201ENST00000516851 102 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 SUMO2P16-201ENST00000519475 264 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 ZNF519P2-201ENST00000557032 169 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AC092954.2-201ENST00000609103 430 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AL021879.1-201ENST00000611756 288 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 AL138726.1-201ENST00000614873 333 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.86□□□□□ -2.27
LRRC42Q9Y546 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
LRRC42Q9Y546 RNU6-873P-201ENST00000363833 107 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.256-201ENST00000364594 104 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.373-201ENST00000365600 103 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 RNU6-483P-201ENST00000384088 108 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.85□□□□□ -2.27
LRRC42Q9Y546 DAP3P1-201ENST00000441522 278 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 NDUFB4P10-201ENST00000452541 359 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 RPL39P38-201ENST00000467018 153 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 SNORA25.14-201ENST00000516481 132 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 FRG2DP-202ENST00000566967 323 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 AL162413.1-201ENST00000603198 110 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 DISC2.1-201ENST00000612827 205 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 MIR8054-201ENST00000620877 86 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 AC006504.8-201ENST00000621046 635 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 AC068647.2-201ENST00000637380 353 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 AC099654.12-201ENST00000639868 649 ntBASIC0.85□□□□□ -2.27
LRRC42Q9Y546 RNU6-451P-201ENST00000362921 107 ntBASIC0.84□□□□□ -2.27
LRRC42Q9Y546 Y_RNA.135-201ENST00000363439 95 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms