Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AL137159.1-201ENST00000452808 512 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AC016925.1-201ENST00000458303 298 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 SNORA4.4-201ENST00000515921 135 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 RNU6-897P-201ENST00000517135 105 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AL117187.1-201ENST00000555482 181 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 MIR5007-201ENST00000583098 95 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 AL162730.1-201ENST00000605734 292 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.32□□□□□ -2.04
PKP3Q9Y446 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 IGHVIII-44-202ENST00000636235 289 ntBASIC2.32□□□□□ -2.04
PKP3Q9Y446 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PKP3Q9Y446 RNU6-1309P-201ENST00000363305 108 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 Y_RNA.183-201ENST00000363882 113 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 RNU6-961P-201ENST00000363893 105 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 RNU6-1264P-201ENST00000383891 107 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 MIR548F4-201ENST00000408515 105 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 RAB28P5-201ENST00000427490 651 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 PRELID3BP1-201ENST00000457142 540 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.31□□□□□ -2.04
PKP3Q9Y446 AC093259.1-201ENST00000509755 300 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.31□□□□□ -2.04
PKP3Q9Y446 AC025754.2-201ENST00000606491 432 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.31□□□□□ -2.04
PKP3Q9Y446 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.31□□□□□ -2.04
PKP3Q9Y446 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PKP3Q9Y446 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PKP3Q9Y446 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PKP3Q9Y446 RNU6-1105P-201ENST00000384774 107 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 SRIP3-201ENST00000413200 219 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.3□□□□□ -2.04
PKP3Q9Y446 AL358176.2-201ENST00000425769 204 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 NDUFB4P10-201ENST00000452541 359 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 UBE2DNL-203ENST00000474922 222 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 RNU6-635P-201ENST00000516651 102 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.3□□□□□ -2.04
PKP3Q9Y446 AK6P2-201ENST00000549020 471 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 AC008269.2-201ENST00000561915 1105 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.3□□□□□ -2.04
PKP3Q9Y446 PRR13P7-201ENST00000605538 430 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 AC130454.1-201ENST00000622948 401 ntBASIC2.3□□□□□ -2.04
PKP3Q9Y446 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PKP3Q9Y446 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 Y_RNA.143-201ENST00000363520 106 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 Y_RNA.332-201ENST00000365271 113 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 RNU6-20P-201ENST00000384106 107 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 Y_RNA.500-201ENST00000384466 111 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 MIR548B-201ENST00000385247 97 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC123900.1-201ENST00000420390 96 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 TOMM22P2-201ENST00000430735 237 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC005002.2-201ENST00000438228 269 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AL139109.1-201ENST00000455491 297 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 RNU6-1143P-201ENST00000516125 104 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 RNY3P15-201ENST00000516297 97 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.29□□□□□ -2.04
PKP3Q9Y446 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC005176.2-201ENST00000596933 147 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AL109918.3-201ENST00000603072 338 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 AL049779.4-201ENST00000604500 156 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 MIR3674-201ENST00000636576 68 ntBASIC2.29□□□□□ -2.04
PKP3Q9Y446 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PKP3Q9Y446 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
PKP3Q9Y446 AC007336.1-201ENST00000576365 3828 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU6-626P-201ENST00000363354 107 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU6-770P-201ENST00000363929 105 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 Y_RNA.214-201ENST00000364201 112 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 Y_RNA.230-201ENST00000364348 109 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 SNORA72.2-201ENST00000365028 127 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU6-1310P-201ENST00000384153 107 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU6-975P-201ENST00000384296 105 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PKP3Q9Y446 RPL21P1-201ENST00000399532 476 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNA5SP475-201ENST00000410568 110 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 ELOCP20-201ENST00000422460 345 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNU7-57P-201ENST00000459540 60 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.28□□□□□ -2.04
PKP3Q9Y446 RNA5SP281-201ENST00000516504 135 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 MIR3126-201ENST00000577443 74 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 AC026271.5-201ENST00000577873 130 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
PKP3Q9Y446 MIR376A1-201ENST00000616574 68 ntBASIC2.28□□□□□ -2.04
PKP3Q9Y446 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms