Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 RNU6-418P-201ENST00000384035 107 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 SNORA67.3-201ENST00000384366 140 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
USP35Q9P2H5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.15□□□□□ -1.91
USP35Q9P2H5 RNU7-57P-201ENST00000459540 60 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 AC005786.1-201ENST00000588553 154 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 snoZ196.1-201ENST00000625269 89 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 MIR1291-201ENST00000627649 87 ntBASIC3.15□□□□□ -1.91
USP35Q9P2H5 AC008555.8-201ENST00000623602 2168 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP35Q9P2H5 RNU6-318P-201ENST00000384283 103 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 IPO7P1-201ENST00000442031 636 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.14□□□□□ -1.91
USP35Q9P2H5 AL442163.3-201ENST00000554110 156 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 AC090971.5-201ENST00000621102 293 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.14□□□□□ -1.91
USP35Q9P2H5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.14□□□□□ -1.91
USP35Q9P2H5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP35Q9P2H5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP35Q9P2H5 SNORD87-201ENST00000364849 89 ntBASIC3.13□□□□□ -1.91
USP35Q9P2H5 Y_RNA.419-201ENST00000384041 102 ntBASIC3.13□□□□□ -1.91
USP35Q9P2H5 RNY3P4-201ENST00000384428 101 ntBASIC3.13□□□□□ -1.91
USP35Q9P2H5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.13□□□□□ -1.91
USP35Q9P2H5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.13□□□□□ -1.91
USP35Q9P2H5 VN1R91P-201ENST00000594377 169 ntBASIC3.13□□□□□ -1.91
USP35Q9P2H5 MTND4P29-201ENST00000503122 1372 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 RNA5SP361-201ENST00000362686 118 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 RNU1-51P-201ENST00000365345 176 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 Y_RNA.496-201ENST00000384444 101 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 MIR548B-201ENST00000385247 97 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 AL137792.2-201ENST00000443484 235 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 PCNPP5-201ENST00000452246 481 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 RNU6-221P-201ENST00000459541 99 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 AC023442.1-201ENST00000531247 422 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.12□□□□□ -1.91
USP35Q9P2H5 AK6P2-201ENST00000549020 471 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.12□□□□□ -1.91
USP35Q9P2H5 MIR7111-201ENST00000619751 72 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 U1.36-201ENST00000620684 176 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 AL159152.1-201ENST00000635019 2587 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP35Q9P2H5 AC006026.1-201ENST00000444025 1803 ntBASIC3.12□□□□□ -1.91
USP35Q9P2H5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USP35Q9P2H5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
USP35Q9P2H5 Y_RNA.11-201ENST00000362375 109 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 Y_RNA.39-201ENST00000362620 98 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 MIR628-201ENST00000385229 95 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 UQCRBP2-201ENST00000447827 297 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 RPL23AP42-201ENST00000471152 471 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 SNRPGP18-201ENST00000553000 214 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 AL353149.1-201ENST00000610667 244 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 uc_338.22-201ENST00000622722 187 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 MIR4272-201ENST00000635924 64 ntBASIC3.11□□□□□ -1.91
USP35Q9P2H5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP35Q9P2H5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
USP35Q9P2H5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
USP35Q9P2H5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
USP35Q9P2H5 AL355497.1-201ENST00000406262 551 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 MIR1185-2-201ENST00000408687 86 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 MTCO3P19-201ENST00000415864 321 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 AC008134.1-201ENST00000420943 193 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 TOMM22P2-201ENST00000430735 237 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 AC016717.1-201ENST00000448918 286 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 RNU7-169P-201ENST00000459456 61 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 SUMO2P18-201ENST00000518873 252 ntBASIC3.1□□□□□ -1.91
USP35Q9P2H5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.1□□□□□ -1.91
USP35Q9P2H5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.1□□□□□ -1.91
USP35Q9P2H5 SNORA16B-201ENST00000364674 135 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 SNORA6-201ENST00000384033 151 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 MIR597-201ENST00000384968 97 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 AL023284.1-201ENST00000403956 276 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 ATP5J2P3-201ENST00000451550 258 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.09□□□□□ -1.91
USP35Q9P2H5 Y_RNA.661-201ENST00000516003 99 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 AP005660.1-201ENST00000522972 293 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.09□□□□□ -1.91
USP35Q9P2H5 AC092447.9-201ENST00000603395 144 ntBASIC3.09□□□□□ -1.91
USP35Q9P2H5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
USP35Q9P2H5 MIR410-201ENST00000362222 80 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 SNORD12B-201ENST00000410433 91 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 RNU6-57P-201ENST00000411348 103 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
USP35Q9P2H5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.08□□□□□ -1.92
USP35Q9P2H5 IGLV3-17-201ENST00000519099 244 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.08□□□□□ -1.92
USP35Q9P2H5 MIR6895-201ENST00000613497 78 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 AC083806.3-201ENST00000614016 455 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 AL606534.2-204ENST00000635008 178 ntBASIC3.08□□□□□ -1.92
USP35Q9P2H5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP35Q9P2H5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
USP35Q9P2H5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.07□□□□□ -1.92
USP35Q9P2H5 Y_RNA.27-201ENST00000362540 103 ntBASIC3.07□□□□□ -1.92
USP35Q9P2H5 SNORA48.1-201ENST00000390879 135 ntBASIC3.07□□□□□ -1.92
USP35Q9P2H5 AL512604.1-201ENST00000404812 257 ntBASIC3.07□□□□□ -1.92
USP35Q9P2H5 ELOCP21-201ENST00000412558 336 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms