Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MTND3P23-201ENST00000431980 347 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RPS3AP52-201ENST00000435639 297 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RPS29P23-201ENST00000458635 123 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AP000870.1-201ENST00000472927 406 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AC091179.3-201ENST00000474761 144 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 Y_RNA.683-201ENST00000516508 93 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AL160236.1-201ENST00000556317 195 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 uc_338.5-201ENST00000611839 155 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 AC099654.5-201ENST00000636479 350 ntBASIC1.66□□□□□ -2.14
CHCHD3Q9NX63 RNU11-5P-201ENST00000391216 129 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 FGF7P8-201ENST00000402994 292 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 AC082651.2-201ENST00000496833 166 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 AC105029.1-201ENST00000520250 669 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 AL359075.3-201ENST00000613288 217 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 AC006435.5-201ENST00000624486 112 ntBASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHCHD3Q9NX63 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 RNU6-1059P-201ENST00000363752 98 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.279-201ENST00000364763 95 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.339-201ENST00000365325 102 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.594-201ENST00000410373 140 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 RNU6-1050P-201ENST00000410388 107 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.619-201ENST00000410951 90 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AL445646.1-201ENST00000431784 216 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AC245517.4-201ENST00000448601 281 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 snoU13.27-201ENST00000459278 104 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AC069439.1-201ENST00000494739 167 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 RNA5SP437-201ENST00000517249 129 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 CBX3P8-201ENST00000532412 525 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AL137100.2-201ENST00000555786 315 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 PRR13P7-201ENST00000605538 430 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 PISRT1.1-201ENST00000616930 107 ntBASIC1.64□□□□□ -2.15
CHCHD3Q9NX63 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.364-201ENST00000365532 101 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 MIR548B-201ENST00000385247 97 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 RNA5SP323-201ENST00000391094 133 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 MIR190B-201ENST00000401119 79 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AC016909.1-201ENST00000415916 166 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 COX6CP10-201ENST00000416832 224 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AL121890.1-201ENST00000435457 205 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 RPL31P58-201ENST00000469001 379 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 RNU1-142P-201ENST00000516682 145 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 APOOP3-201ENST00000536787 586 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 UBL5P4-201ENST00000562584 236 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 MIR4298-201ENST00000584380 73 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 AL355802.3-201ENST00000607571 545 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 MTND5P10-201ENST00000603719 1809 ntBASIC1.63□□□□□ -2.15
CHCHD3Q9NX63 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.2-201ENST00000362330 96 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.184-201ENST00000363884 108 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.287-201ENST00000364853 94 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 RNU6-281P-201ENST00000384212 103 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 AL023284.1-201ENST00000403956 276 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 SDAD1P3-201ENST00000427380 333 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 RPS26P45-201ENST00000471748 340 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 RPS29P21-201ENST00000496272 170 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 MIR5695-201ENST00000579717 85 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 AL133216.2-202ENST00000634512 349 ntBASIC1.62□□□□□ -2.15
CHCHD3Q9NX63 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 CASC19-280ENST00000642102 1351 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 MTND5P35-201ENST00000557537 1720 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 RNU6-845P-201ENST00000362578 103 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 SNORD114-1-201ENST00000362705 72 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.67-201ENST00000362870 100 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 RNY1P16-201ENST00000363063 111 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.248-201ENST00000364501 109 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.415-201ENST00000384012 112 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 SNORA64-201ENST00000384674 134 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 RNU6-417P-201ENST00000384712 107 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 MIR150-201ENST00000385048 84 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 RNU7-94P-201ENST00000459576 63 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 Y_RNA.691-201ENST00000516611 103 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 MIR2355-201ENST00000517199 87 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 SNORA77B-201ENST00000578179 125 ntBASIC1.61□□□□□ -2.15
CHCHD3Q9NX63 AC104984.5-201ENST00000586878 94 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms