Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 AC005858.4-201ENST00000623191 700 ntBASIC1.92□□□□□ -2.1
BLOC1S4Q9NUP1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.160-201ENST00000363677 92 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 MIR1185-2-201ENST00000408687 86 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 AL121890.1-201ENST00000435457 205 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 HSPE1P21-201ENST00000438283 308 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 AC007677.1-201ENST00000445757 515 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 RNU7-30P-201ENST00000516835 62 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 MIR5701-3-201ENST00000578890 82 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 MIR5701-1-201ENST00000585138 82 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 MIR5701-2-201ENST00000615634 82 ntBASIC1.91□□□□□ -2.1
BLOC1S4Q9NUP1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
BLOC1S4Q9NUP1 MIR424-201ENST00000362227 98 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-845P-201ENST00000362578 103 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-950P-201ENST00000384651 107 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 MIR548B-201ENST00000385247 97 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 RNA5SP323-201ENST00000391094 133 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 MIR190B-201ENST00000401119 79 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 FGF7P8-201ENST00000402994 292 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 MTND1P2-201ENST00000430604 821 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 JTBP1-201ENST00000441314 247 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 RPL26P26-201ENST00000480251 434 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 CBX3P4-201ENST00000538909 354 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 MIR4255-201ENST00000579351 72 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
BLOC1S4Q9NUP1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 RNY1P16-201ENST00000363063 111 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-727P-201ENST00000363592 107 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-417P-201ENST00000384712 107 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.670-201ENST00000516255 105 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 RNU1-142P-201ENST00000516682 145 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 AC022432.1-201ENST00000595739 310 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.89□□□□□ -2.11
BLOC1S4Q9NUP1 MTND5P35-201ENST00000557537 1720 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 SNORD87-201ENST00000364849 89 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-876P-201ENST00000391295 104 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 COX6CP10-201ENST00000416832 224 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 TOMM22P2-201ENST00000430735 237 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 snoU13.27-201ENST00000459278 104 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 RNA5SP437-201ENST00000517249 129 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AC105029.1-201ENST00000520250 669 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 APOOP3-201ENST00000536787 586 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AL137100.2-201ENST00000555786 315 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 MIR4422-201ENST00000581938 83 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 AC009229.3-201ENST00000608056 282 ntBASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.88□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.184-201ENST00000363884 108 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-338P-201ENST00000383888 105 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 RNU6-281P-201ENST00000384212 103 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AL445305.1-201ENST00000432577 575 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.635-201ENST00000459041 101 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AC093023.1-201ENST00000547375 507 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 MIR3684-201ENST00000579779 74 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AC016925.2-201ENST00000605108 242 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 AC005014.2-201ENST00000607795 599 ntBASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
BLOC1S4Q9NUP1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 MTND5P16-201ENST00000460269 1703 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 MT-TL1-201ENST00000386347 75 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 Y_RNA.595-201ENST00000410403 105 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 AC016909.1-201ENST00000415916 166 ntBASIC1.86□□□□□ -2.11
BLOC1S4Q9NUP1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms